diff --git a/.github/workflows/check_changelogs.yml b/.github/workflows/check_changelogs.yml index b6c01e70fc..c391f63738 100644 --- a/.github/workflows/check_changelogs.yml +++ b/.github/workflows/check_changelogs.yml @@ -32,3 +32,6 @@ jobs: - name: Check zarr-indexing changelog entries run: uv run --no-sync python ci/check_changelog_entries.py packages/zarr-indexing/changes + + - name: Check zarr-http-server changelog entries + run: uv run --no-sync python ci/check_changelog_entries.py packages/zarr-http-server/changes diff --git a/.github/workflows/zarr-http-server-release.yml b/.github/workflows/zarr-http-server-release.yml new file mode 100644 index 0000000000..b8940f7560 --- /dev/null +++ b/.github/workflows/zarr-http-server-release.yml @@ -0,0 +1,117 @@ +name: zarr-http-server release + +on: + workflow_dispatch: + push: + tags: + - 'zarr_http_server-v*' + +permissions: + contents: read + +concurrency: + group: ${{ github.workflow }}-${{ github.ref }} + cancel-in-progress: false + +jobs: + build: + name: Build wheel and sdist + runs-on: ubuntu-latest + defaults: + run: + shell: bash + working-directory: packages/zarr-http-server + steps: + - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1 + with: + persist-credentials: false + fetch-depth: 0 # hatch-vcs needs full history + tags + + - name: Install Hatch + uses: pypa/hatch@257e27e51a6a5616ed08a39a408a21c35c9931bc + with: + version: '1.16.5' + + - name: Build + run: hatch build + + - uses: actions/upload-artifact@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a # v7.0.1 + with: + name: zarr-http-server-dist + path: packages/zarr-http-server/dist + + test_artifacts: + name: Test built artifacts + needs: [build] + runs-on: ubuntu-latest + steps: + - uses: actions/download-artifact@3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c # v8.0.1 + with: + name: zarr-http-server-dist + path: dist + + - name: Install uv + uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0 + with: + enable-cache: false + + - name: Set up Python + run: uv python install 3.12 + + - name: Install built wheel and run import smoke test + run: | + wheel=$(ls dist/*.whl) + uv run --with "${wheel}" --python 3.12 --no-project \ + python -c "import zarr_http_server; print('zarr_http_server', zarr_http_server.__version__)" + + upload_pypi: + name: Upload to PyPI + needs: [build, test_artifacts] + if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags/zarr_http_server-v') + runs-on: ubuntu-latest + environment: + name: zarr-http-server-releases + url: https://pypi.org/p/zarr-http-server + permissions: + id-token: write # required for OIDC trusted publishing + attestations: write # required for artifact attestations + steps: + - uses: actions/download-artifact@3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c # v8.0.1 + with: + name: zarr-http-server-dist + path: dist + + - name: Generate artifact attestation + uses: actions/attest@508db95dd578ae2727ebd6217d5ba78e4fbda05d # v4.2.1 + with: + subject-path: dist/* + + - name: Publish package to PyPI + uses: pypa/gh-action-pypi-publish@dc37677b2e1c63e2034f94d8a5b11f265b73ba33 # v1.14.2 + + upload_testpypi: + name: Upload to TestPyPI + needs: [build, test_artifacts] + if: github.event_name == 'workflow_dispatch' + runs-on: ubuntu-latest + environment: + name: zarr-http-server-releases-test + url: https://test.pypi.org/p/zarr-http-server + permissions: + id-token: write + attestations: write + steps: + - uses: actions/download-artifact@3e5f45b2cfb9172054b4087a40e8e0b5a5461e7c # v8.0.1 + with: + name: zarr-http-server-dist + path: dist + + - name: Generate artifact attestation + uses: actions/attest@508db95dd578ae2727ebd6217d5ba78e4fbda05d # v4.2.1 + with: + subject-path: dist/* + + - name: Publish package to TestPyPI + uses: pypa/gh-action-pypi-publish@dc37677b2e1c63e2034f94d8a5b11f265b73ba33 # v1.14.2 + with: + repository-url: https://test.pypi.org/legacy/ diff --git a/.github/workflows/zarr-http-server.yml b/.github/workflows/zarr-http-server.yml new file mode 100644 index 0000000000..16589f0d7d --- /dev/null +++ b/.github/workflows/zarr-http-server.yml @@ -0,0 +1,139 @@ +name: zarr-http-server + +# Job steps delegate to packages/zarr-http-server/justfile, the single source +# of truth for this package's verbs; CI owns only the python matrix and +# caching. Keeping the commands in one place is what makes `just check` +# locally mean the same thing as a green run here. + +on: + push: + branches: [main] + paths: + - 'packages/zarr-http-server/**' + - '.github/workflows/zarr-http-server.yml' + # The package resolves zarr from the repo root for its own tests, so a + # core change can break it. Run this suite when core changes too. + - 'src/zarr/**' + pull_request: + paths: + - 'packages/zarr-http-server/**' + - '.github/workflows/zarr-http-server.yml' + # The package resolves zarr from the repo root for its own tests, so a + # core change can break it. Run this suite when core changes too. + - 'src/zarr/**' + workflow_dispatch: + +permissions: + contents: read + +concurrency: + group: ${{ github.workflow }}-${{ github.ref }} + cancel-in-progress: true + +jobs: + test: + name: pytest py=${{ matrix.python-version }} + runs-on: ubuntu-latest + defaults: + run: + shell: bash + working-directory: packages/zarr-http-server + strategy: + fail-fast: false + matrix: + python-version: ['3.12', '3.13', '3.14'] + steps: + - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1 + with: + persist-credentials: false + - name: Install uv + uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0 + with: + enable-cache: true + - name: Set up Python ${{ matrix.python-version }} + run: uv python install ${{ matrix.python-version }} + - name: Install just + uses: extractions/setup-just@53165ef7e734c5c07cb06b3c8e7b647c5aa16db3 # v4 + - name: Sync test dependency groups + # The examples group carries the deps the README examples need, so the + # test that reads a served array back with a zarr client runs here + # instead of silently skipping. + run: uv sync --group test --group examples --python ${{ matrix.python-version }} + - name: Run pytest + run: just test + + ruff: + name: ruff + runs-on: ubuntu-latest + defaults: + run: + shell: bash + working-directory: packages/zarr-http-server + steps: + - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1 + with: + persist-credentials: false + - name: Install uv + uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0 + - name: Install just + uses: extractions/setup-just@53165ef7e734c5c07cb06b3c8e7b647c5aa16db3 # v4 + - name: Run ruff + run: just lint + + mypy: + name: mypy + runs-on: ubuntu-latest + defaults: + run: + shell: bash + working-directory: packages/zarr-http-server + steps: + - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1 + with: + persist-credentials: false + - name: Install uv + uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0 + with: + enable-cache: true + - name: Set up Python + run: uv python install 3.12 + - name: Install just + uses: extractions/setup-just@53165ef7e734c5c07cb06b3c8e7b647c5aa16db3 # v4 + - name: Sync test dependency group + run: uv sync --group test --python 3.12 + - name: Run mypy + run: just typecheck + + docs: + name: docs + runs-on: ubuntu-latest + defaults: + run: + shell: bash + working-directory: packages/zarr-http-server + steps: + - uses: actions/checkout@3d3c42e5aac5ba805825da76410c181273ba90b1 # v7.0.1 + with: + persist-credentials: false + - name: Install uv + uses: astral-sh/setup-uv@c771a70e6277c0a99b617c7a806ffedaca235ff9 # v9.0.0 + with: + enable-cache: true + - name: Install just + uses: extractions/setup-just@53165ef7e734c5c07cb06b3c8e7b647c5aa16db3 # v4 + - name: Build docs + run: just docs-check + + zarr-http-server-complete: + name: zarr-http-server complete + needs: [test, ruff, mypy, docs] + if: always() + runs-on: ubuntu-latest + steps: + - name: Check failure + if: | + contains(needs.*.result, 'failure') || + contains(needs.*.result, 'cancelled') + run: exit 1 + - name: Success + run: echo Success! diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 7f49f47187..54345c819e 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -2,11 +2,13 @@ ci: autoupdate_commit_msg: "chore: update pre-commit hooks" autoupdate_schedule: "monthly" autofix_prs: false - # mypy runs as a `language: system` hook via `uv run mypy`, which needs `uv` - # and the repo checkout to resolve the dev environment from `uv.lock` — - # unavailable on pre-commit.ci's runners. It is covered instead by the Lint - # GitHub Actions workflow and by local prek runs. - skip: [mypy] + # Both of these are `language: system` hooks that shell out to the local + # toolchain — `uv` for mypy, `uv` and `just` for the docs build — and need + # the repo checkout to resolve their environments from `uv.lock`. Neither is + # available on pre-commit.ci's runners. Each is covered instead by a GitHub + # Actions job (Lint for mypy, zarr-http-server for the docs build) and by + # local prek runs. + skip: [mypy, zarr-http-server-docs] default_stages: [pre-commit, pre-push] @@ -50,6 +52,25 @@ repos: pass_filenames: false always_run: true types_or: [python, pyi] + # Builds the zarr-http-server docs site with warnings as errors, which + # catches a dead cross-reference or a nav entry pointing at a file that + # no longer exists before it reaches CI. + # + # `stages: [pre-push]` overrides the default of running on every commit: + # this is a whole-site build, too slow to pay per commit and only + # actionable before the code leaves the machine. `files:` limits it to + # changes that touch the package, and `pass_filenames: false` because + # mkdocs builds the site, not a list of files. Delegating to the + # justfile keeps one definition of the build shared with CI. + - id: zarr-http-server-docs + name: zarr-http-server docs build + language: system + entry: >- + just --justfile packages/zarr-http-server/justfile + --working-directory packages/zarr-http-server docs-check + pass_filenames: false + files: ^packages/zarr-http-server/ + stages: [pre-push] - repo: https://github.com/scientific-python/cookie rev: 2026.06.18 hooks: diff --git a/packages/zarr-http-server/.readthedocs.yaml b/packages/zarr-http-server/.readthedocs.yaml new file mode 100644 index 0000000000..62a1e82b77 --- /dev/null +++ b/packages/zarr-http-server/.readthedocs.yaml @@ -0,0 +1,30 @@ +# Read the Docs configuration for the zarr-http-server docs site, separate from +# the zarr-python site configured by the repo-root .readthedocs.yaml. The RTD +# project for zarr-http-server must set its configuration-file path to +# packages/zarr-http-server/.readthedocs.yaml. +version: 2 + +build: + os: ubuntu-22.04 + tools: + python: "3.12" + jobs: + post_checkout: + # Cancel pull request builds that do not touch this package. Exit code + # 183 cancels the build and reports success to the Git provider. Scoped + # to PR builds ("external" versions) because origin/main is only a + # meaningful diff base there. + - | + if [ "$READTHEDOCS_VERSION_TYPE" = "external" ] && git diff --quiet origin/main -- packages/zarr-http-server; + then + exit 183; + fi + install: + - pip install --upgrade pip + - pip install ./packages/zarr-http-server --group packages/zarr-http-server/pyproject.toml:docs + build: + html: + - mkdocs build --strict -f packages/zarr-http-server/mkdocs.yml --site-dir $READTHEDOCS_OUTPUT/html + +mkdocs: + configuration: packages/zarr-http-server/mkdocs.yml diff --git a/packages/zarr-http-server/CHANGELOG.md b/packages/zarr-http-server/CHANGELOG.md new file mode 100644 index 0000000000..7c4bc92cad --- /dev/null +++ b/packages/zarr-http-server/CHANGELOG.md @@ -0,0 +1,3 @@ +# Release notes + + diff --git a/packages/zarr-http-server/LICENSE.txt b/packages/zarr-http-server/LICENSE.txt new file mode 100644 index 0000000000..1e8da4d242 --- /dev/null +++ b/packages/zarr-http-server/LICENSE.txt @@ -0,0 +1,21 @@ +The MIT License (MIT) + +Copyright (c) 2015-2025 Zarr Developers + +Permission is hereby granted, free of charge, to any person obtaining a copy +of this software and associated documentation files (the "Software"), to deal +in the Software without restriction, including without limitation the rights +to use, copy, modify, merge, publish, distribute, sublicense, and/or sell +copies of the Software, and to permit persons to whom the Software is +furnished to do so, subject to the following conditions: + +The above copyright notice and this permission notice shall be included in all +copies or substantial portions of the Software. + +THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, +OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE +SOFTWARE. diff --git a/packages/zarr-http-server/README.md b/packages/zarr-http-server/README.md new file mode 100644 index 0000000000..069b33abf8 --- /dev/null +++ b/packages/zarr-http-server/README.md @@ -0,0 +1,405 @@ +# zarr-http-server + +HTTP server for Zarr stores, arrays, and groups. + +`zarr-http-server` exposes a Zarr `Store`, `Array`, or `Group` over HTTP via an +ASGI app, so any HTTP-capable client (including zarr-python itself, via +`FsspecStore` or `ObjectStore`) can read the data. The app is built on +[Starlette](https://www.starlette.io/) and can be run with any ASGI server; +the `serve` / `serve_background` helpers run it with +[Uvicorn](https://www.uvicorn.org/). + +## Installation + +```bash +pip install zarr-http-server +``` + +### Building an ASGI App + +`store_app` creates an ASGI app that exposes every key +in a store. Only point it at a store whose full contents are safe to serve +publicly — it grants read (and, if `PUT` is enabled, write) access to +everything the store contains, with no per-key filtering: + +```python +import zarr +from zarr_http_server import store_app + +store = zarr.storage.MemoryStore() +zarr.create_array(store, shape=(100, 100), chunks=(10, 10), dtype="float64") + +app = store_app(store) + +# Run with any ASGI server, e.g. Uvicorn: +# uvicorn my_module:app --host 0.0.0.0 --port 8000 +``` + +`node_app` creates an ASGI app that only serves keys +belonging to a specific `Array` or `Group`. Requests for keys outside the node +receive a 404, even if those keys exist in the underlying store: + +```python +import zarr +from zarr_http_server import node_app + +store = zarr.storage.MemoryStore() +root = zarr.open_group(store) +root.create_array("a", shape=(10,), dtype="int32") +root.create_array("b", shape=(20,), dtype="float64") + +# Only serve the array at "a" — requests for "b" will return 404. +arr = root["a"] +app = node_app(arr) +``` + +### Running the Server + +Build an app with `store_app` or `node_app`, then run it. `serve` blocks +until the server is stopped, which is the shape for a script or a container +entrypoint: + +```python +from zarr_http_server import serve, store_app + +serve(store_app(store), host="127.0.0.1", port=8000) +``` + +`serve_background` instead starts the server in a daemon thread and returns a +`BackgroundServer` as soon as the socket is listening, so the caller can carry +on. These are two functions rather than one with a flag, because they differ +in the only thing that matters at a call site: whether control comes back. The +handle is also a context manager: + +Both default to `port="auto"`, which prefers port 8000 but falls back to any +free port if it is taken, reporting the result through `server.url` and +uvicorn's startup line. An **explicit** port means the opposite — bind exactly +that or fail — because a caller who names one usually has a proxy or a +container port mapping expecting the server there, and silently moving would +break it while looking healthy. `port=0` keeps its usual meaning of "any free +port, no preference". + +The example below also *reads back* over HTTP, which is a client-side +concern: `zarr.open_array(server.url)` goes through `FsspecStore`, which needs +an HTTP-capable fsspec that `zarr-http-server` does not pull in. + +```bash +pip install "fsspec[http]" +``` + + +```python +import numpy as np + +import zarr +from zarr_http_server import node_app, serve_background +from zarr.storage import MemoryStore + +store = MemoryStore() +arr = zarr.create_array(store, shape=(100,), chunks=(10,), dtype="float64") +arr[:] = np.arange(100, dtype="float64") + +with serve_background(node_app(arr), host="127.0.0.1") as server: + # Now open the served array from another zarr client. + remote = zarr.open_array(server.url, mode="r") + np.testing.assert_array_equal(remote[:], arr[:]) +# Server is shut down automatically when the block exits. +``` + +### Serving Several Nodes + +Serving two arrays does not mean running two servers. Which approach fits +depends on where the arrays live. + +If they share a parent group, serve the parent — `node_app` recurses through +its members, so both are reachable under one port and node scoping still +applies to everything outside it: + +```python +server = serve_background(node_app(root)) +# -> /a/zarr.json, /a/c/0, /b/zarr.json, ... +``` + +If everything in the store is safe to expose, `store_app(store)` does the +same for the whole key space. + +Otherwise — arrays in *different* stores, or nodes that are not siblings — +`store_app` and `node_app` return plain Starlette apps, so mount them and run +the result: + +```python +from starlette.applications import Starlette +from starlette.routing import Mount + +from zarr_http_server import node_app, serve_background + +app = Starlette(routes=[ + Mount("/first", app=node_app(one)), + Mount("/second", app=node_app(other)), +]) +server = serve_background(app) +``` + +Each mount keeps its own validation, so a request under one cannot reach +another's data — `/first/../second/zarr.json` and its percent-encoded +spellings all return 404. + +Both runners take any ASGI app, so the split is clean: what an app *serves* +(`methods`, `cors_options`, `max_body_size`) is settled when the app is built, +while `serve` / `serve_background` only decide how it runs (`host`, `port`, +`shutdown_timeout`, `uvicorn_options`). + +### Serving from a Notebook + +A notebook needs a server that outlives the cell that started it, so the +`with serve_background(...)` form above is the wrong shape — it shuts the server down +as soon as the block ends. Start it, keep the handle, and stop it later: + +```python +# cell 1 — start +server = serve_background(node_app(array), host="127.0.0.1") +print(server.url) # e.g. http://127.0.0.1:54635 + +# cell 2..n — use it, across as many cells as you like +httpx.get(f"{server.url}/zarr.json") + +# last cell — stop +server.shutdown() +``` + +Two things make this comfortable in a kernel you re-run. `serve_background` +runs Uvicorn in a daemon thread with its own event loop, so it never touches +the kernel's loop and cannot block it. And its default `port="auto"` falls +back to a free port when 8000 is taken — re-running a start cell without +stopping the previous server is the classic notebook mistake, and a fixed port +fails there with *address already in use*. `server.url` reports the port +actually bound. + +If you forget to stop one, the thread is a daemon, so restarting the kernel +always clears it — and since each start takes a fresh port, a forgotten server +does not block the next one. + +[`examples/serve_notebook.ipynb`](examples/serve_notebook.ipynb) is a runnable +version of this, covering metadata and chunk reads, byte ranges, and that +writes are refused by default. It is executed by the test suite, so it cannot +drift from the code. + +### Uvicorn Configuration + +`serve` and `serve_background` name the options most callers need — `host`, +`port`, `shutdown_timeout` — and forward anything else to +`uvicorn.Config` through `uvicorn_options`, so nothing uvicorn can do is out +of reach: + +```python +server = serve_background( + store_app(store), + host="0.0.0.0", + port=8443, + uvicorn_options={ + "ssl_keyfile": "key.pem", + "ssl_certfile": "cert.pem", + "proxy_headers": True, + "forwarded_allow_ips": "10.0.0.0/8", + "log_level": "warning", + }, +) +``` + +Keys you pass are merged over the ones set for you, so they win. `server.url` +reflects the scheme actually in use (`https` when TLS is configured) and is +`None` when the server is not bound to a TCP host and port — a `uds` or `fd` +bind has no URL to report. + +### CORS Support + +Both `store_app` and `node_app` accept a `CorsOptions` parameter to enable +[CORS](https://developer.mozilla.org/en-US/docs/Web/HTTP/CORS) middleware for +browser-based clients: + +```python +from zarr_http_server import CorsOptions, store_app + +app = store_app( + store, + cors_options=CorsOptions( + allow_origins=["*"], + allow_methods=["GET"], + ), +) +``` + +`CorsOptions` carries every parameter Starlette's `CORSMiddleware` accepts — +`allow_headers`, `allow_credentials`, `allow_origin_regex`, +`allow_private_network`, `expose_headers` and `max_age` as well as the two +above — so configuring CORS never means reaching around this package. All keys +are optional. + +Two defaults differ from Starlette's, because the server knows things the +caller should not have to. It emits `Content-Range` on every ranged response, +which is *not* a CORS-safelisted response header, so `expose_headers` defaults +to `["Content-Range"]` — otherwise a browser client can read the bytes but not +learn which bytes it got. And it accepts a `Range` request header, so +`allow_headers` defaults to `["Range"]` — otherwise a preflight naming `Range` +is rejected. A key you supply replaces the default outright, so +`expose_headers=[]` means "expose nothing". + +### HTTP Range Requests + +The server supports the standard `Range` header for partial reads. The three +forms defined by [RFC 7233](https://httpwg.org/specs/rfc7233.html) are supported: + +| Header | Meaning | +| -------------------- | ------------------------------ | +| `bytes=0-99` | First 100 bytes | +| `bytes=100-` | Everything from byte 100 | +| `bytes=-50` | Last 50 bytes | + +A successful range request returns HTTP 206 (Partial Content) with a +`Content-Range` header, including for suffix ranges — the server resolves +`bytes=-50` against the object's size so the response says which bytes it +carries. + +A range that is well-formed but names nothing readable — one lying wholly +beyond the end of the object, an inverted one such as `bytes=5-2`, or +`bytes=-0` — returns 416 (Range Not Satisfiable). A last-byte-position past +the end of the object is *not* in that category: per RFC 9110 §14.1.2 it is +clamped, so `bytes=0-999999` on a short object returns the whole thing. + +A `Range` header the server cannot use is **ignored** rather than refused, per +RFC 9110 §14.2: an unrecognized unit (`chars=0-7`), a multi-range request +(`bytes=0-7, 10-20`, which this server does not build multipart responses +for), or malformed syntax all return 200 with the full representation. + +### Read-only Serving + +Read-only is the default. `store_app(store)` and `node_app(node)` accept +`GET` and `HEAD` and answer **405** to `PUT`, `POST`, `DELETE` and `PATCH` — +no argument is needed to get there. + +`POST` is not merely unrouted, it is unconfigurable: the accepted methods are +`GET`, `HEAD` and `PUT`, and asking for anything else raises `ValueError` when +the app is built. There is no handler behavior for `POST`, so no configuration +can produce one. + +Two named sets let a call site state which it is, instead of leaving it to the +presence or absence of an argument: + +```python +from zarr_http_server import READ_ONLY_HTTP_METHODS, READ_WRITE_HTTP_METHODS, store_app + +app = store_app(store, methods=READ_ONLY_HTTP_METHODS) # GET, HEAD +app = store_app(store, methods=READ_WRITE_HTTP_METHODS) # GET, HEAD, PUT +``` + +The distinction also exists in the type domain. `ReadOnlyHTTPMethod` is a +`Literal["GET", "HEAD"]`, so a read-only set can be *declared* rather than +merely configured — a `frozenset[ReadOnlyHTTPMethod]` containing `"PUT"` is a +type error, not a runtime surprise: + +```python +from zarr_http_server import ReadOnlyHTTPMethod + +reads: frozenset[ReadOnlyHTTPMethod] = frozenset({"GET", "HEAD"}) # ok +reads = frozenset({"GET", "PUT"}) # type error +``` + +Both constants are derived from these Literals, so the runtime sets and the +static types cannot disagree about what the server serves. + +`READ_ONLY_HTTP_METHODS` is exactly the default, so passing it changes nothing +except that the intent is now written down. The practical value is the other +direction: a writable app *must* name a method set, so +`grep -r 'methods=' ` finds every place that opts into writes. + +For a guarantee that does not depend on getting `methods` right, make the +*store* read-only. The store refuses writes itself, so no routing mistake — +now or in a later edit — can produce one: + +```python +app = store_app(store.with_read_only(True)) + +# For a node, open it read-only and node_app inherits that store: +app = node_app(zarr.open_array(store, mode="r")) +``` + +These two layers are independent, and the store is the stronger one: it holds +even if the HTTP layer is misconfigured. Asking for both at once — +`methods={"GET", "PUT"}` on a read-only store — is a contradiction that can +never succeed, so it raises `ValueError` at construction rather than turning +into a 403 for whichever client tries to write first. + +### Write Support + +By default only reads are accepted: `GET`, and `HEAD` alongside it. Starlette +routes `HEAD` wherever `GET` goes, as RFC 9110 §9.3.2 asks of every origin +server, so naming `GET` gets you both — a `HEAD` is answered from the value's +size without transferring it. To enable writes, pass `methods={"GET", "PUT"}`: + +```python +app = store_app(store, methods={"GET", "PUT"}) +``` + +Accepted methods are `GET`, `HEAD`, and `PUT`; anything else raises +`ValueError` when the app is built, since the handler has no behavior for it. + +A `PUT` request stores the request body at the given path and returns 204 (No +Content). Bodies are capped at `DEFAULT_MAX_BODY_SIZE` (256 MiB) and a larger +one returns 413 (Content Too Large) -- `Store.set` takes a whole buffer, so an +accepted body is held in memory in full. Raise or remove the cap with +`max_body_size`: + +```python +from zarr_http_server import DEFAULT_MAX_BODY_SIZE, store_app + +app = store_app(store, methods={"GET", "PUT"}, max_body_size=None) +``` + +Note that `store_app` exposes every key in the store, so `PUT` grants +unrestricted write access to all of it. `node_app` confines writes to keys +belonging to the node -- though a client that can write a node's metadata can +change what that node contains, and so what it will serve. + +`store_app` also does not *validate* keys, because it proxies the store's raw +key space and has no array semantics to check against. A client that misspells +a chunk key — `c/00/00` where zarr writes `c/0/0` — gets a successful write to +a key no reader will ever consult, so the data is stored but invisible to +anyone opening the array. `node_app` rejects such a key with 404, since it +knows which node it is serving and therefore which keys are real. If you are +serving a zarr hierarchy to clients you do not control and writes are enabled, +prefer `node_app`. + +### Shutting Down + +`BackgroundServer.shutdown()` (and leaving the `with` block) waits up to +`shutdown_timeout` seconds -- 5 by default -- for in-flight requests to finish +before forcing the server closed: + +```python +with serve_background(node_app(arr), shutdown_timeout=30) as server: + ... +``` + +## Example + +`examples/serve.py` creates an in-memory Zarr array, serves it over HTTP with +`serve_background`, and fetches the `zarr.json` metadata document and a raw chunk +using `httpx`. + +`examples/serve_notebook.ipynb` is the notebook equivalent, showing how to +start a server in one cell and stop it in another. Both are executed by the +test suite. + +Running it with uv is the simplest route — the script declares its own +dependencies inline, so uv installs them for you: + +```bash +uv run examples/serve.py +``` + +To run it with a plain interpreter, install its `httpx` dependency first: + +```bash +pip install httpx +python examples/serve.py +``` diff --git a/packages/zarr-http-server/changes/3732.feature.md b/packages/zarr-http-server/changes/3732.feature.md new file mode 100644 index 0000000000..accd91ab81 --- /dev/null +++ b/packages/zarr-http-server/changes/3732.feature.md @@ -0,0 +1,3 @@ +Initial release of `zarr-http-server`: an HTTP server exposing Zarr stores, +arrays, and groups over an ASGI app, extracted from the +`zarr.experimental.serve` prototype in zarr-python. diff --git a/packages/zarr-http-server/changes/README.md b/packages/zarr-http-server/changes/README.md new file mode 100644 index 0000000000..80f0be782c --- /dev/null +++ b/packages/zarr-http-server/changes/README.md @@ -0,0 +1,25 @@ +Writing a changelog entry for `zarr-http-server` +--------------------------------------------- + +Fragments in **this** directory are released notes for the `zarr-http-server` +package only — kept separate from the parent zarr-python `changes/` +directory so a PR touching only `packages/zarr-http-server/` produces a +release note for this package only. + +Please put a new file in this directory named `xxxx..md`, where + +- `xxxx` is the pull request number associated with this entry +- `` is one of: + - feature + - bugfix + - doc + - removal + - misc + +Inside the file, please write a short description of what you have +changed, and how it impacts users of `zarr-http-server`. + +A `zarr-http-server` release runs `towncrier build` in `packages/zarr-http-server/`, +which consumes the fragments here and updates `CHANGELOG.md`. Fragments +that describe parent zarr-python changes (not the server package) +belong in the top-level `changes/` directory, not here. diff --git a/packages/zarr-http-server/docs/_static/favicon-96x96.png b/packages/zarr-http-server/docs/_static/favicon-96x96.png new file mode 100644 index 0000000000..e77977ccf4 Binary files /dev/null and b/packages/zarr-http-server/docs/_static/favicon-96x96.png differ diff --git a/packages/zarr-http-server/docs/_static/logo_bw.png b/packages/zarr-http-server/docs/_static/logo_bw.png new file mode 100644 index 0000000000..df1979d3cc Binary files /dev/null and b/packages/zarr-http-server/docs/_static/logo_bw.png differ diff --git a/packages/zarr-http-server/docs/api/index.md b/packages/zarr-http-server/docs/api/index.md new file mode 100644 index 0000000000..749e11b964 --- /dev/null +++ b/packages/zarr-http-server/docs/api/index.md @@ -0,0 +1,31 @@ +--- +title: API reference +--- + +# API reference + +Everything public is re-exported from the top-level `zarr_http_server` +namespace; the private `_serve` and `_keys` modules are implementation detail +and carry no compatibility guarantee. + +## Building an app + +::: zarr_http_server.store_app + +::: zarr_http_server.node_app + +## Running a server + +::: zarr_http_server.serve + +::: zarr_http_server.serve_background + +::: zarr_http_server.BackgroundServer + +## Configuration + +::: zarr_http_server.CorsOptions + +::: zarr_http_server.HTTPMethod + +::: zarr_http_server.DEFAULT_MAX_BODY_SIZE diff --git a/packages/zarr-http-server/docs/index.md b/packages/zarr-http-server/docs/index.md new file mode 100644 index 0000000000..5671c12d00 --- /dev/null +++ b/packages/zarr-http-server/docs/index.md @@ -0,0 +1,58 @@ +# zarr-http-server + +HTTP server for Zarr stores, arrays, and groups. + +`zarr-http-server` is developed in the +[zarr-python repository](https://github.com/zarr-developers/zarr-python/tree/main/packages/zarr-http-server) +and released independently of `zarr` itself. Install it with: + +``` +pip install zarr-http-server +``` + +!!! warning "Experimental" + + This package is experimental. Its API may change or be removed at any + point. + +## What this is + +`zarr-http-server` exposes a Zarr `Store`, `Array`, or `Group` over HTTP via an +ASGI app, so any HTTP-capable client — including zarr-python itself, via +`FsspecStore` or `ObjectStore` — can read the data. The app is built on +[Starlette](https://www.starlette.io/) and can be run with any ASGI server; +the `serve` / `serve_background` helpers run it with +[Uvicorn](https://www.uvicorn.org/). + +Two levels of exposure are available: + +- **Whole store** ([`store_app`][zarr_http_server.store_app], + run with [`serve`][zarr_http_server.serve]) — serves every key in a + store, exposing its entire key/value space. +- **Single node** ([`node_app`][zarr_http_server.node_app], + run with [`serve_background`][zarr_http_server.serve_background]) — serves only the keys + belonging to one `Array` or `Group`. Requests for keys outside that node + return 404 even when those keys exist in the underlying store. + +Byte-range reads, configurable CORS headers, and a configurable set of allowed +HTTP methods are handled by the app. + +!!! danger "Serving a whole store grants access to all of it" + + `store_app` applies no per-key filtering. Only point it + at a store whose full contents are safe to serve, and note that enabling + `PUT` grants write access to everything the store contains. + +## Getting started + +The [README](https://github.com/zarr-developers/zarr-python/blob/main/packages/zarr-http-server/README.md) +carries worked examples for building an ASGI app, running a blocking or +background server, and configuring CORS and allowed methods. Runnable +versions live in +[`examples/`](https://github.com/zarr-developers/zarr-python/tree/main/packages/zarr-http-server/examples). + +## Reference + +- [API reference](api/index.md) +- [Changelog](https://github.com/zarr-developers/zarr-python/blob/main/packages/zarr-http-server/CHANGELOG.md) +- [License (MIT)](https://github.com/zarr-developers/zarr-python/blob/main/packages/zarr-http-server/LICENSE.txt) diff --git a/packages/zarr-http-server/examples/serve.py b/packages/zarr-http-server/examples/serve.py new file mode 100644 index 0000000000..45caa9ea67 --- /dev/null +++ b/packages/zarr-http-server/examples/serve.py @@ -0,0 +1,45 @@ +# /// script +# requires-python = ">=3.12" +# dependencies = [ +# "zarr-http-server @ git+https://github.com/zarr-developers/zarr-python.git@main#subdirectory=packages/zarr-http-server", +# "httpx", +# ] +# /// +""" +Serve a Zarr array over HTTP and fetch its metadata and chunks. + +This example creates an in-memory array, serves it in a background thread, +then uses ``httpx`` to request the ``zarr.json`` metadata document and a raw +chunk. +""" + +import json + +import httpx +import numpy as np +import zarr +from zarr.storage import MemoryStore + +from zarr_http_server import node_app, serve_background + +# -- create an array -------------------------------------------------------- +store = MemoryStore() +data = np.arange(1000, dtype="uint8").reshape(10, 10, 10) +# no compression +arr = zarr.create_array(store, data=data, chunks=(5, 5, 5), write_data=True, compressors=None) + +# -- serve it in the background --------------------------------------------- +# port=0 asks the OS for a free port, so running this twice -- or running it +# while something else holds 8000 -- works. `server.url` reports what it bound. +with serve_background(node_app(arr), host="127.0.0.1") as server: + # -- fetch metadata ------------------------------------------------------ + resp = httpx.get(f"{server.url}/zarr.json") + assert resp.status_code == 200 + meta = resp.json() + print("zarr.json:") + print(json.dumps(meta, indent=2)) + + # -- fetch a raw chunk --------------------------------------------------- + resp = httpx.get(f"{server.url}/c/0/0/0") + assert resp.status_code == 200 + print(f"\nchunk c/0/0/0: {len(resp.content)} bytes") diff --git a/packages/zarr-http-server/examples/serve_notebook.ipynb b/packages/zarr-http-server/examples/serve_notebook.ipynb new file mode 100644 index 0000000000..e751a526c1 --- /dev/null +++ b/packages/zarr-http-server/examples/serve_notebook.ipynb @@ -0,0 +1,213 @@ +{ + "cells": [ + { + "cell_type": "markdown", + "id": "6cb56289", + "metadata": {}, + "source": [ + "# Serving a Zarr array from a notebook\n", + "\n", + "A notebook needs a server that outlives the cell that started it, which is the\n", + "one thing the `with serve_background(...)` form in the README cannot give\n", + "that shuts the server down as soon as the block ends.\n", + "\n", + "The notebook pattern is instead:\n", + "\n", + "1. start with `serve_background` and keep the handle,\n", + "2. use the server across as many cells as you like,\n", + "3. `shutdown()` when you are done.\n", + "\n", + "Two details make this comfortable in a kernel you re-run:\n", + "\n", + "- **`serve_background`** runs uvicorn in a daemon thread with its own event\n", + " loop, so it never touches the kernel's loop and cannot block it.\n", + "- **`port=\"auto\"`**, its default, prefers port 8000 but takes a free one if\n", + " it is busy. Re-running a start cell without stopping the previous server is\n", + " the classic notebook mistake, and a fixed port fails there with *address\n", + " already in use*. `server.url` reports the port actually bound." + ] + }, + { + "cell_type": "code", + "execution_count": null, + "id": "e2e217fa", + "metadata": {}, + "outputs": [], + "source": [ + "import numpy as np\n", + "import zarr\n", + "from zarr.storage import MemoryStore\n", + "\n", + "from zarr_http_server import node_app, serve_background\n", + "\n", + "store = MemoryStore()\n", + "array = zarr.create_array(\n", + " store,\n", + " data=np.arange(1000, dtype=\"uint8\").reshape(10, 10, 10),\n", + " chunks=(5, 5, 5),\n", + " compressors=None,\n", + " write_data=True,\n", + ")\n", + "array.info" + ] + }, + { + "cell_type": "markdown", + "id": "35752272", + "metadata": {}, + "source": [ + "## Start\n", + "\n", + "`serve_background` returns a `BackgroundServer` as soon as the socket is\n", + "so the next cell can use it immediately." + ] + }, + { + "cell_type": "code", + "execution_count": null, + "id": "b5010cdb", + "metadata": {}, + "outputs": [], + "source": [ + "server = serve_background(node_app(array), host=\"127.0.0.1\")\n", + "\n", + "print(f\"serving at {server.url}\")\n", + "assert server.url is not None" + ] + }, + { + "cell_type": "markdown", + "id": "d4e1f8d6", + "metadata": {}, + "source": [ + "## Use it\n", + "\n", + "The server is alive across cells now. Anything that speaks HTTP can read from\n", + "it -- here `httpx`, but a browser or another zarr client works the same way.\n", + "\n", + "(With `fsspec[http]` installed you can also do\n", + "`zarr.open_array(server.url, mode=\"r\")` to read the array back through zarr\n", + "itself.)" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "id": "5ac501fa", + "metadata": {}, + "outputs": [], + "source": [ + "import httpx\n", + "\n", + "metadata = httpx.get(f\"{server.url}/zarr.json\", timeout=30)\n", + "print(metadata.status_code, metadata.headers[\"content-type\"])\n", + "assert metadata.status_code == 200\n", + "assert metadata.json()[\"shape\"] == [10, 10, 10]" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "id": "c7a94eff", + "metadata": {}, + "outputs": [], + "source": [ + "chunk = httpx.get(f\"{server.url}/c/0/0/0\", timeout=30)\n", + "print(f\"chunk c/0/0/0: {len(chunk.content)} bytes\")\n", + "assert chunk.status_code == 200\n", + "\n", + "# Byte ranges work too, and say which bytes came back.\n", + "part = httpx.get(f\"{server.url}/c/0/0/0\", headers={\"Range\": \"bytes=0-9\"}, timeout=30)\n", + "print(part.status_code, part.headers[\"content-range\"], part.content)\n", + "assert part.status_code == 206\n", + "assert part.content == chunk.content[:10]" + ] + }, + { + "cell_type": "markdown", + "id": "c8fd3ea2", + "metadata": {}, + "source": [ + "## Writes are off unless you ask\n", + "\n", + "The default is read-only, so a stray `PUT` from a notebook cell -- or from\n", + "anyone else who can reach the port -- is refused." + ] + }, + { + "cell_type": "code", + "execution_count": null, + "id": "2f6bee45", + "metadata": {}, + "outputs": [], + "source": [ + "refused = httpx.put(f\"{server.url}/c/0/0/0\", content=b\"nope\", timeout=30)\n", + "print(\"PUT ->\", refused.status_code)\n", + "assert refused.status_code == 405" + ] + }, + { + "cell_type": "markdown", + "id": "74f4bebc", + "metadata": {}, + "source": [ + "## Stop\n", + "\n", + "`shutdown()` waits for in-flight requests, then forces the server closed. It\n", + "raises if the thread will not stop, so a silent failure cannot leave you\n", + "believing the port is free when it is not." + ] + }, + { + "cell_type": "code", + "execution_count": null, + "id": "53a3e8d4", + "metadata": {}, + "outputs": [], + "source": [ + "server.shutdown()\n", + "\n", + "# The port really is closed now.\n", + "try:\n", + " httpx.get(f\"{server.url}/zarr.json\", timeout=5)\n", + "except httpx.HTTPError as exc:\n", + " print(f\"as expected, no longer serving: {type(exc).__name__}\")\n", + "else:\n", + " raise AssertionError(\"server still responding after shutdown\")" + ] + }, + { + "cell_type": "markdown", + "id": "8a7742e0", + "metadata": {}, + "source": [ + "## If you forget to stop one\n", + "\n", + "The server thread is a daemon, so it dies with the kernel -- restarting the\n", + "kernel always clears it. Because `port=0` picks a fresh port each time, a\n", + "forgotten server does not block the next one either; it just holds a port\n", + "until the kernel exits.\n", + "\n", + "If you want the shutdown tied to a block rather than a cell, the context\n", + "manager form still works inside a single cell:\n", + "\n", + "```python\n", + "with serve_background(node_app(array)) as server:\n", + " ... # everything must happen in this cell\n", + "```" + ] + } + ], + "metadata": { + "kernelspec": { + "display_name": "Python 3", + "language": "python", + "name": "python3" + }, + "language_info": { + "name": "python" + } + }, + "nbformat": 4, + "nbformat_minor": 5 +} diff --git a/packages/zarr-http-server/justfile b/packages/zarr-http-server/justfile new file mode 100644 index 0000000000..d65b1b53b7 --- /dev/null +++ b/packages/zarr-http-server/justfile @@ -0,0 +1,68 @@ +# Development verbs for the zarr-http-server package. Recipes run with this +# directory as the working directory regardless of where `just` is invoked. +# +# CI calls these recipes rather than repeating their commands, so a green run +# in .github/workflows/zarr-http-server.yml means the same thing as a green +# `just check` here. + +# Pinned to the ruff that .pre-commit-config.yaml uses, so this and the +# pre-commit gate enforce one standard. An unpinned `uvx ruff` floats to the +# newest release: when ruff 0.16 began selecting BLE001 under the root +# config's `B` prefix, this job failed on rules the pinned ruff never enforced, +# with no code change to blame. Bump alongside the pre-commit rev. +ruff_version := "0.16.0" + +# List available recipes +default: + @just --list + +# The `examples` group carries the deps the README examples need, so the test +# that reads a served array back with a zarr client runs here instead of +# silently skipping. +# Run the test suite; extra args are passed to pytest +test *args: + uv run --group test --group examples pytest tests {{ args }} + +# Lint the package sources and tests +lint: + uvx ruff@{{ ruff_version }} check . + +# This package type-checks with mypy (see [tool.mypy] in pyproject.toml) +# rather than the pyright used by the other packages under packages/. +# Type-check the package sources +typecheck: + uv run --group test --with mypy mypy src + +# Run everything CI runs for this package +check: lint typecheck test docs-check + +# Preview the changelog that the next release would generate +changelog-draft: + uvx towncrier build --draft --version Unreleased + +# Build this package's documentation site, warnings as errors +docs-check: + env DISABLE_MKDOCS_2_WARNING=true uv run --group docs mkdocs build --strict + +# With no argument, uses port 8000 if free, otherwise an ephemeral free port; +# an explicitly requested port is used as-is so a conflict fails loudly. +# Serve this package's documentation site +docs-serve port="": + #!/usr/bin/env bash + set -euo pipefail + port="{{ port }}" + if [ -z "$port" ]; then + port=$(uv run --group docs python -c ' + import socket + s = socket.socket() + try: + s.bind(("127.0.0.1", 8000)) + except OSError: + s.close() + s = socket.socket() + s.bind(("127.0.0.1", 0)) + print(s.getsockname()[1]) + s.close() + ') + fi + exec env DISABLE_MKDOCS_2_WARNING=true uv run --group docs mkdocs serve -a "localhost:$port" diff --git a/packages/zarr-http-server/mkdocs.yml b/packages/zarr-http-server/mkdocs.yml new file mode 100644 index 0000000000..4e7843f36d --- /dev/null +++ b/packages/zarr-http-server/mkdocs.yml @@ -0,0 +1,99 @@ +site_name: zarr-http-server +# The package lives in the zarr-python monorepo; point the header source +# widget at the package directory rather than the repository root. +repo_name: zarr-python/packages/zarr-http-server +repo_url: https://github.com/zarr-developers/zarr-python/tree/main/packages/zarr-http-server +# Absolute because mkdocs would otherwise append this to repo_url's subpath. +edit_uri: https://github.com/zarr-developers/zarr-python/edit/main/packages/zarr-http-server/docs/ +site_description: HTTP server for Zarr stores, arrays, and groups. +site_author: Davis Bennett +site_url: !ENV [READTHEDOCS_CANONICAL_URL, 'https://zarr-http-server.readthedocs.io/'] +docs_dir: docs +use_directory_urls: true + +nav: + - index.md + - API Reference: + - api/index.md + - Changelog: https://github.com/zarr-developers/zarr-python/blob/main/packages/zarr-http-server/CHANGELOG.md + +watch: + - src + +theme: + language: en + name: material + logo: _static/logo_bw.png + favicon: _static/favicon-96x96.png + + palette: + # Light mode + - media: "(prefers-color-scheme: light)" + scheme: default + toggle: + icon: material/brightness-7 + name: Switch to dark mode + + # Dark mode + - media: "(prefers-color-scheme: dark)" + scheme: slate + toggle: + icon: material/brightness-4 + name: Switch to light mode + + font: + text: Roboto + code: Roboto Mono + + features: + - content.code.annotate + - content.code.copy + - navigation.indexes + - navigation.instant + - navigation.tracking + - search.suggest + - search.share + +plugins: + - autorefs + - search + - mkdocstrings: + enable_inventory: true + handlers: + python: + paths: [src] + options: + allow_inspection: true + docstring_section_style: list + docstring_style: numpy + inherited_members: true + line_length: 60 + separate_signature: true + show_root_heading: true + show_signature_annotations: true + show_source: true + show_symbol_type_toc: true + signature_crossrefs: true + show_if_no_docstring: true + extensions: + - griffe_inherited_docstrings + + inventories: + - https://docs.python.org/3/objects.inv + - https://zarr.readthedocs.io/en/stable/objects.inv + +markdown_extensions: + - admonition + - attr_list + - def_list + - footnotes + - md_in_html + - pymdownx.details + - pymdownx.superfences + - toc: + permalink: true + - pymdownx.highlight: + anchor_linenums: true + line_spans: __span + pygments_lang_class: true + - pymdownx.inlinehilite diff --git a/packages/zarr-http-server/pyproject.toml b/packages/zarr-http-server/pyproject.toml new file mode 100644 index 0000000000..ef38d67e49 --- /dev/null +++ b/packages/zarr-http-server/pyproject.toml @@ -0,0 +1,141 @@ +[build-system] +requires = ["hatchling>=1.29.0", "hatch-vcs"] +build-backend = "hatchling.build" + +[project] +name = "zarr-http-server" +dynamic = ["version"] +description = "HTTP server for Zarr stores, arrays, and groups." +readme = "README.md" +requires-python = ">=3.12" +license = "MIT" +license-files = ["LICENSE.txt"] +authors = [ + { name = "Davis Bennett", email = "davis.v.bennett@gmail.com" }, +] +classifiers = [ + "Development Status :: 4 - Beta", + "Intended Audience :: Developers", + "Intended Audience :: Information Technology", + "Intended Audience :: Science/Research", + "License :: OSI Approved :: MIT License", + "Operating System :: OS Independent", + "Programming Language :: Python", + "Programming Language :: Python :: 3", + "Programming Language :: Python :: 3.12", + "Programming Language :: Python :: 3.13", + "Programming Language :: Python :: 3.14", + "Topic :: Scientific/Engineering", + "Topic :: Internet :: WWW/HTTP :: HTTP Servers", + "Typing :: Typed", +] +keywords = ["zarr", "http", "server", "asgi"] +dependencies = [ + "zarr>=3.1", + "starlette>=1.0", + "uvicorn>=0.29", +] + +[project.urls] +Homepage = "https://github.com/zarr-developers/zarr-python" +Source = "https://github.com/zarr-developers/zarr-python/tree/main/packages/zarr-http-server" +Issues = "https://github.com/zarr-developers/zarr-python/issues" +Changelog = "https://github.com/zarr-developers/zarr-python/blob/main/packages/zarr-http-server/CHANGELOG.md" +Documentation = "https://github.com/zarr-developers/zarr-python/blob/main/packages/zarr-http-server/README.md" + +[dependency-groups] +test = [ + "pytest", + "httpx", + "httpx2", + "hypothesis", + # Executing examples/serve_notebook.ipynb in the suite: nbformat reads it, + # nbclient runs it, ipykernel is the kernel it runs in. + "nbformat", + "nbclient", + "ipykernel", +] +examples = [ + # Optional dependencies to run the README examples. Reading a served + # array back with `zarr.open_array(url)` goes through FsspecStore, which + # needs an HTTP-capable fsspec; `examples/serve.py` uses httpx. + "fsspec[http]", + "httpx", +] +docs = [ + # Pins match the zarr-python docs environment in the repo-root + # pyproject.toml so the two sites render with the same toolchain. + "mkdocs-material==9.7.7", + "mkdocs==1.6.1", + "mkdocstrings==1.0.6", + "mkdocstrings-python==2.0.5", + "griffe-inherited-docstrings==1.1.3", + # mkdocstrings uses ruff to format rendered signatures + "ruff==0.16.0", +] + +# Dev-only: resolve zarr from the repo root so package tests run against +# in-repo zarr. Affects uv resolution only, not published metadata. +[tool.uv.sources] +zarr = { path = "../..", editable = true } + +[tool.hatch.version] +source = "vcs" +tag-pattern = '^zarr_http_server-v(?P.+)$' +# `git_describe_command` ensures we get the zarr_http_server tags instead of latest. +# `local_scheme` strips the git commit info so the appending info is just a counter from latest tag. +# test-pypi doesn't accept git commit info in tags, and the count should be enough to distinguish unique runs. +raw-options = { root = "../..", git_describe_command = "git describe --dirty --tags --long --match zarr_http_server-v*", local_scheme = "no-local-version" } + +[tool.hatch.build.targets.wheel] +packages = ["src/zarr_http_server"] + +[tool.ruff] +extend = "../../pyproject.toml" +target-version = "py312" + +[tool.pytest.ini_options] +minversion = "7" +testpaths = ["tests"] +xfail_strict = true +addopts = ["-ra", "--strict-config", "--strict-markers"] +filterwarnings = [ + "error", +] + +[tool.mypy] +files = ["src"] +python_version = "3.12" +ignore_missing_imports = true +namespace_packages = false +pretty = true +show_error_code_links = true +show_error_context = true +strict = true +warn_unreachable = true +enable_error_code = ["ignore-without-code", "redundant-expr", "truthy-bool", "truthy-iterable"] + +[tool.numpydoc_validation] +# Mirrors the root zarr-python config so moved docstrings (written for that +# config) don't trip stricter defaults just because this package has its own +# pyproject.toml. See https://numpydoc.readthedocs.io/en/latest/validation.html#built-in-validation-checks +checks = [ + "GL10", + "SS04", + "PR02", + "PR03", + "PR05", + "PR06", +] + +[tool.towncrier] +# Fragments for this package live alongside the package source, separate +# from the parent zarr-python `changes/` directory, so a PR touching only +# `packages/zarr-http-server/` produces a release note for this package only. +directory = "changes" +filename = "CHANGELOG.md" +package = "zarr_http_server" +underlines = ["", "", ""] +title_format = "## {version} ({project_date})" +issue_format = "[#{issue}](https://github.com/zarr-developers/zarr-python/issues/{issue})" +start_string = "\n" diff --git a/packages/zarr-http-server/src/zarr_http_server/__init__.py b/packages/zarr-http-server/src/zarr_http_server/__init__.py new file mode 100644 index 0000000000..4f4fbd22f8 --- /dev/null +++ b/packages/zarr-http-server/src/zarr_http_server/__init__.py @@ -0,0 +1,38 @@ +"""Zarr-http-server: HTTP server for Zarr stores, arrays, and groups.""" + +from importlib.metadata import version + +from zarr_http_server._serve import ( + AUTO_PORT, + DEFAULT_MAX_BODY_SIZE, + DEFAULT_PORT, + READ_ONLY_HTTP_METHODS, + READ_WRITE_HTTP_METHODS, + BackgroundServer, + CorsOptions, + HTTPMethod, + ReadOnlyHTTPMethod, + node_app, + serve, + serve_background, + store_app, +) + +__version__ = version("zarr-http-server") + +__all__ = [ + "AUTO_PORT", + "DEFAULT_MAX_BODY_SIZE", + "DEFAULT_PORT", + "READ_ONLY_HTTP_METHODS", + "READ_WRITE_HTTP_METHODS", + "BackgroundServer", + "CorsOptions", + "HTTPMethod", + "ReadOnlyHTTPMethod", + "__version__", + "node_app", + "serve", + "serve_background", + "store_app", +] diff --git a/packages/zarr-http-server/src/zarr_http_server/_keys.py b/packages/zarr-http-server/src/zarr_http_server/_keys.py new file mode 100644 index 0000000000..e468cd066d --- /dev/null +++ b/packages/zarr-http-server/src/zarr_http_server/_keys.py @@ -0,0 +1,218 @@ +"""Utilities for determining the set of valid store keys for zarr nodes. + +A zarr node (array or group) implicitly defines a subset of keys in the +underlying store. For an **array** the valid keys are: + +* metadata documents (``zarr.json`` for v3, ``.zarray`` / ``.zattrs`` for v2) +* chunk (or shard) keys whose decoded coordinates fall within the storage grid + +For a **group** the valid keys are: + +* its own metadata documents +* any path ``/`` where ```` is a direct member and + ```` is recursively valid for that child +""" + +from __future__ import annotations + +from typing import TYPE_CHECKING, Any + +ZARR_JSON = "zarr.json" +ZARRAY_JSON = ".zarray" +ZGROUP_JSON = ".zgroup" +ZATTRS_JSON = ".zattrs" +ZMETADATA_V2_JSON = ".zmetadata" + +if TYPE_CHECKING: + from zarr import Array, Group + +_ARRAY_METADATA_KEYS_V3 = frozenset({ZARR_JSON}) +_ARRAY_METADATA_KEYS_V2 = frozenset({ZARRAY_JSON, ZATTRS_JSON}) +_GROUP_METADATA_KEYS_V3 = frozenset({ZARR_JSON}) +_GROUP_METADATA_KEYS_V2 = frozenset({ZGROUP_JSON, ZATTRS_JSON, ZMETADATA_V2_JSON}) + + +def array_metadata_keys(zarr_format: int) -> frozenset[str]: + """Return the metadata key basenames an array owns, for a zarr format. + + Parameters + ---------- + zarr_format : int + The zarr format version (2 or 3). + + Returns + ------- + frozenset of str + """ + if zarr_format == 3: + return _ARRAY_METADATA_KEYS_V3 + return _ARRAY_METADATA_KEYS_V2 + + +def group_metadata_keys(zarr_format: int) -> frozenset[str]: + """Return the metadata key basenames a group owns, for a zarr format. + + Parameters + ---------- + zarr_format : int + The zarr format version (2 or 3). + + Returns + ------- + frozenset of str + """ + if zarr_format == 3: + return _GROUP_METADATA_KEYS_V3 + return _GROUP_METADATA_KEYS_V2 + + +def decode_chunk_key(array: Array[Any], key: str) -> tuple[int, ...] | None: + """Try to decode *key* into chunk coordinates for *array*. + + Parameters + ---------- + array : Array + The array whose chunk key encoding should be used. + key : str + The candidate chunk key string. + + Returns + ------- + tuple of int, or None + The decoded coordinates, or ``None`` if *key* is not a valid chunk key. + """ + try: + if array.metadata.zarr_format == 2: + coords = tuple(int(p) for p in key.split(array.metadata.dimension_separator)) + # A 0-d v2 array holds its single chunk under "0", which decodes + # to a 1-tuple that no 0-d grid could match. + if len(array.shape) == 0: + return () if coords == (0,) else None + return coords + + # Ask zarr rather than predicting it: the encoding owns its own + # grammar, so a new or third-party chunk key encoding decodes here + # without this package knowing anything about it. + return array.metadata.chunk_key_encoding.decode_chunk_key(key) + except (ValueError, TypeError, NotImplementedError): + return None + + +def _shard_grid_shape(array: Array[Any]) -> tuple[int, ...]: + """Shape of the shard grid, falling back to the chunk grid when unsharded.""" + shard_shape = array.shards if array.shards is not None else array.chunks + return tuple(-(-s // c) for s, c in zip(array.shape, shard_shape, strict=True)) + + +def is_valid_chunk_key(array: Array[Any], key: str) -> bool: + """Check whether *key* is a valid chunk key for *array*. + + Decodes the key, checks that the resulting coordinates fall within the + storage grid (shard grid if sharding is used, chunk grid otherwise), and + requires the key to be spelled exactly as zarr itself would spell it. + + That last check is what makes the accepted key set equal to the set of + keys zarr can actually read. Decoding alone is lenient -- `int` accepts + leading zeros, a leading `+`/`-`, surrounding whitespace, underscore + separators, and non-ASCII decimal digits -- so `c/00/00` and `c/0/0` + decode to the same coordinates while naming *different* store keys. A + write to the non-canonical spelling would be stored under a key no reader + ever looks up: the client sees success and the data is invisible. + + Parameters + ---------- + array : Array + The array to validate against. + key : str + The candidate chunk key string. + + Returns + ------- + bool + """ + coords = decode_chunk_key(array, key) + if coords is None: + return False + grid = _shard_grid_shape(array) + if len(coords) != len(grid): + return False + if not all(0 <= c < g for c, g in zip(coords, grid, strict=True)): + return False + return array.metadata.encode_chunk_key(coords) == key + + +def is_valid_array_key(array: Array[Any], key: str) -> bool: + """Check whether *key* is a valid store key for *array*. + + Valid keys are metadata documents and chunk keys. + + Parameters + ---------- + array : Array + The array to validate against. + key : str + The candidate key, relative to the array's root. + + Returns + ------- + bool + """ + if key in array_metadata_keys(array.metadata.zarr_format): + return True + return is_valid_chunk_key(array, key) + + +def is_valid_node_key(node: Array[Any] | Group, key: str) -> bool: + """Check whether *key* is a valid store key relative to *node*. + + For an ``Array``, valid keys are metadata documents and chunk keys. + + For a ``Group``, valid keys are the group's own metadata documents, or + a path of the form ``/`` where ```` is a direct + member and ```` is recursively valid for that child. + + Parameters + ---------- + node : Array or Group + The zarr node to validate against. + key : str + The candidate key, relative to the node's root. + + Returns + ------- + bool + """ + from zarr import Array + + if isinstance(node, Array): + return is_valid_array_key(node, key) + + # Group + if key in group_metadata_keys(node.metadata.zarr_format): + return True + + # Try to match the first path component against a child member. + if "/" in key: + child_name, remainder = key.split("/", 1) + else: + # A bare name with no slash can't be a valid group-level key — + # groups contain children (which have subkeys), not bare keys. + return False + + try: + child = node[child_name] + except KeyError: + # There is no such member, so no key beneath it can be valid. + # + # Only a missing name is caught here. Anything else -- an I/O error + # reading the child's metadata, unparsable JSON, a codec from a + # plugin this process lacks -- means the key could not be *judged*, + # which is not the same as judging it absent. Reporting those as 404 + # would be a lie with teeth: under the v3 spec an absent chunk is an + # uninitialized one, so a correct reader answers a 404 by silently + # substituting the array's fill value over data that exists. Letting + # them propagate surfaces a 500, which is the honest answer and the + # one a client cannot mistake for data. + return False + + return is_valid_node_key(child, remainder) diff --git a/packages/zarr-http-server/src/zarr_http_server/_serve.py b/packages/zarr-http-server/src/zarr_http_server/_serve.py new file mode 100644 index 0000000000..dce1df6b12 --- /dev/null +++ b/packages/zarr-http-server/src/zarr_http_server/_serve.py @@ -0,0 +1,1170 @@ +from __future__ import annotations + +import asyncio +import errno +import logging +import ntpath +import socket +import sys +import threading +import time +from enum import Enum, auto +from functools import partial +from typing import TYPE_CHECKING, Any, Literal, Self, TypedDict, cast, get_args + +from zarr.abc.store import OffsetByteRequest, RangeByteRequest, SuffixByteRequest +from zarr.buffer import cpu + +from zarr_http_server._keys import array_metadata_keys, group_metadata_keys, is_valid_node_key + +if TYPE_CHECKING: + from collections.abc import Mapping + from collections.abc import Set as AbstractSet + + import uvicorn + from starlette.applications import Starlette + from starlette.requests import Request + from starlette.responses import Response + from zarr import Array, Group + from zarr.abc.store import ByteRequest, Store + +__all__ = [ + "AUTO_PORT", + "DEFAULT_MAX_BODY_SIZE", + "DEFAULT_PORT", + "READ_ONLY_HTTP_METHODS", + "READ_WRITE_HTTP_METHODS", + "BackgroundServer", + "CorsOptions", + "HTTPMethod", + "ReadOnlyHTTPMethod", + "node_app", + "serve", + "serve_background", + "store_app", +] + + +class CorsOptions(TypedDict, total=False): + """Options forwarded to Starlette's `CORSMiddleware`. + + Every parameter the middleware accepts appears here, so configuring CORS + never requires reaching around this package. Keys left out fall back to + the defaults described below; a key that is present is used verbatim, + including an empty list. + + Two defaults differ from Starlette's own, because this server knows + something its caller should not have to. It emits `Content-Range` on + every ranged response, which is *not* a CORS-safelisted response header -- + with Starlette's empty `expose_headers` a browser client can read the + bytes but not learn which bytes it got. And it accepts a `Range` request + header, which Starlette's empty `allow_headers` would reject at preflight. + + * `expose_headers` defaults to `["Content-Range"]` + * `allow_headers` defaults to `["Range"]` + + Everything else defaults to the middleware's own value: no origins, `GET` + only, no credentials, no origin regex, no private-network access, and a + 600-second preflight cache. + """ + + allow_origins: list[str] + allow_methods: list[str] + allow_headers: list[str] + allow_credentials: bool + allow_origin_regex: str | None + allow_private_network: bool + expose_headers: list[str] + max_age: int + + +_CORS_DEFAULTS: CorsOptions = { + "expose_headers": ["Content-Range"], + "allow_headers": ["Range"], +} + + +ReadOnlyHTTPMethod = Literal["GET", "HEAD"] +"""An HTTP method that cannot modify the store. + +Distinguished from `HTTPMethod` in the type domain, not only at runtime, so a +read-only interface can be *declared* rather than merely configured: a +parameter annotated `AbstractSet[ReadOnlyHTTPMethod]` cannot be handed `"PUT"` +without a type error, whatever the value turns out to be at runtime. + +`HEAD` belongs here because Starlette routes it wherever `GET` goes, which is +what RFC 9110 §9.3.2 asks of an origin server. It is answered from the value's +size rather than by building and discarding a body. +""" + +_WriteHTTPMethod = Literal["PUT"] +"""An HTTP method that modifies the store. + +Private because nothing needs to name "the write methods" on its own -- it +exists so `HTTPMethod` can be defined as the union rather than as a third +hand-written list of the same strings. +""" + +HTTPMethod = ReadOnlyHTTPMethod | _WriteHTTPMethod +"""An HTTP method this server implements. + +`GET` and `HEAD` read a key; `PUT` writes one. Other verbs are not accepted: +the handler has no behavior for them, so serving them would silently answer +as if they were `GET`. +""" + +# Derived from the types above rather than restated, so the runtime sets and +# the static types cannot disagree about what this server serves. Adding a +# method to a Literal is then the only edit needed. +READ_ONLY_HTTP_METHODS: frozenset[ReadOnlyHTTPMethod] = frozenset(get_args(ReadOnlyHTTPMethod)) +"""Methods that only read. The default for every app in this package. + +Naming the set makes a read-only deployment say so at the call site, rather +than being the absence of an argument: + + store_app(store, methods=READ_ONLY_HTTP_METHODS) + +Typed as a set of `ReadOnlyHTTPMethod`, so a caller building on it keeps the +static guarantee: adding `"PUT"` to a `frozenset[ReadOnlyHTTPMethod]` is a +type error, not a runtime surprise. + +The stronger guarantee is a read-only store, which holds however `methods` is +configured -- see `store.with_read_only(True)`. +""" + +READ_WRITE_HTTP_METHODS: frozenset[HTTPMethod] = frozenset( + get_args(ReadOnlyHTTPMethod) + get_args(_WriteHTTPMethod) +) +"""Methods that read and write. Serving these grants clients write access. + +Every writable app must name a method set, so this constant is also what makes +writable deployments findable: grepping for `READ_WRITE_HTTP_METHODS` (or for +`methods=` generally) turns up every place that opts in. +""" + +_SUPPORTED_METHODS: frozenset[str] = READ_WRITE_HTTP_METHODS + +_LOGGER = logging.getLogger("uvicorn.error") +"""uvicorn's own logger, so a port fallback appears alongside its startup lines.""" + +DEFAULT_PORT = 8000 +"""Port tried first when `port="auto"`.""" + +AUTO_PORT: Literal["auto"] = "auto" +"""Sentinel for `port`: prefer `DEFAULT_PORT`, but settle for any free port. + +An explicit port is a requirement -- it binds that port or fails -- because a +caller who names one usually has something else expecting the server there. +`"auto"` says the opposite: no particular port is needed, so a collision +should not stop the server from starting. `port=0` keeps its usual meaning of +"any free port", with no preference. +""" + +_STARTUP_TIMEOUT = 5.0 +"""Seconds to wait for a background server to report that it is listening.""" + +_STARTUP_ABANDON_TIMEOUT = 5.0 +"""Seconds to wait for a server that failed to start to stop again.""" + +_SHUTDOWN_JOIN_MARGIN = 1.0 +"""Seconds to wait beyond uvicorn's graceful bound before forcing shutdown. + +uvicorn spends a fixed ~0.2s tearing down (a 0.1s loop tick plus a 0.1s +sleep) before its own `timeout_graceful_shutdown` wait begins, so a join that +merely equals that bound is guaranteed to expire first and escalate to +`force_exit` -- which makes uvicorn skip ASGI lifespan shutdown. +""" + +DEFAULT_MAX_BODY_SIZE = 256 * 1024 * 1024 +"""Default cap on a `PUT` body, in bytes. + +`Store.set` takes a whole `Buffer`, so an accepted body is held in memory in +full; the body is read incrementally and abandoned once it passes this cap, +so one request cannot size the server's memory use. Pass +`max_body_size=None` to lift the cap and read the body whole. +""" + + +class BackgroundServer: + """A running background HTTP server that can be used as a context manager. + + Wraps a ``uvicorn.Server`` running in a daemon thread. When used as a + context manager the server is shut down automatically on exit. + + Parameters + ---------- + server : uvicorn.Server + The running uvicorn server instance. + thread : threading.Thread + The daemon thread running the server. + host : str or None + The host the server was asked to bind, or ``None`` when it is not + listening on a TCP socket. + port : int or None + The port actually bound, or ``None`` when the server is not listening + on a TCP socket. + scheme : str, optional + URL scheme the server is reachable over. Defaults to ``"http"``. + shutdown_timeout : int, optional + Seconds to wait for in-flight requests to finish gracefully during + :meth:`shutdown` before forcing the server closed. Defaults to ``5``. + + Examples + -------- + >>> with serve_background(node_app(arr)) as server: # doctest: +SKIP + ... print(f"Listening on {server.host}:{server.port}") + ... # server is shut down when the block exits + """ + + def __init__( + self, + server: uvicorn.Server, + thread: threading.Thread, + *, + host: str | None, + port: int | None, + scheme: str = "http", + shutdown_timeout: int = 5, + ) -> None: + self._server = server + self._thread = thread + self.host = host + self.port = port + self.scheme = scheme + self._shutdown_timeout = shutdown_timeout + + @property + def url(self) -> str | None: + """The base URL of the running server. + + ``None`` when the server is not listening on a TCP socket -- a unix + socket or an inherited file descriptor has no host and port, and + inventing one would be a URL that connects to nothing. + """ + if self.host is None or self.port is None: + return None + return f"{self.scheme}://{self.host}:{self.port}" + + def shutdown(self) -> None: + """Signal the server to shut down and wait for it to stop. + + Waits for the server thread to exit on its own, then escalates to + ``force_exit`` if it has not, so a request wedged outside uvicorn's + loop cannot block here forever. + + Raises + ------ + RuntimeError + If the thread is still running after both waits. Returning + normally would report success for a server that is still bound to + its port and still serving, which the caller cannot detect any + other way. + """ + self._server.should_exit = True + # Outlast uvicorn's own graceful wait rather than matching it. uvicorn + # spends roughly 0.2s on teardown (a 0.1s loop tick plus a 0.1s sleep) + # *before* its `timeout_graceful_shutdown` wait even begins, so an + # equal bound here always expires first -- escalating to force_exit on + # the path that is supposed to be the orderly one, which makes uvicorn + # skip ASGI lifespan shutdown entirely. + self._thread.join(timeout=self._graceful_timeout + _SHUTDOWN_JOIN_MARGIN) + if self._thread.is_alive(): + self._server.force_exit = True + self._thread.join(timeout=self._shutdown_timeout) + + if self._thread.is_alive(): + raise RuntimeError( + "Server thread did not stop within " + f"{self._graceful_timeout + _SHUTDOWN_JOIN_MARGIN + self._shutdown_timeout:.1f}s, " + "even after force_exit. The server may still be serving and " + "holding its port; a request blocked in a store call cannot be " + "cancelled from here." + ) + + @property + def _graceful_timeout(self) -> float: + """uvicorn's own graceful-shutdown bound, whoever configured it.""" + configured = self._server.config.timeout_graceful_shutdown + return float(configured) if configured is not None else float(self._shutdown_timeout) + + def __enter__(self) -> Self: + return self + + def __exit__(self, *args: object) -> None: + self.shutdown() + + +class _RangeVerdict(Enum): + """The outcome of a Range header that does not name a readable range.""" + + IGNORE = auto() + """Serve the full representation with 200, as if no Range had been sent.""" + + UNSATISFIABLE = auto() + """Answer 416: the range is well-formed but names nothing readable.""" + + +_MAX_BYTE_POS = sys.maxsize +"""Largest byte position this server will pass to a store. + +Range bounds arrive as arbitrary-precision Python integers, but a store +ultimately turns them into an index-sized `seek`/`read`. Feeding an oversized +value through raises `OverflowError`/`ValueError` from deep inside the store +rather than producing a response, so bounds are clamped or rejected here. +""" + + +def _parse_int(text: str) -> int | None: + """Parse a byte position, accepting only the canonical spelling of one. + + `int` is lenient in ways an HTTP byte position is not -- it accepts + surrounding whitespace, a leading `+`/`-`, underscore separators, and + non-ASCII decimal digits -- so `bytes=+0-1` and `bytes=0_0-1` would parse. + RFC 9110 defines a byte position as 1*DIGIT. + """ + if not text.isascii() or not text.isdigit(): + return None + return int(text) + + +def _parse_range_header(range_header: str) -> ByteRequest | _RangeVerdict: + """Parse an HTTP Range header into a ByteRequest. + + A header this server cannot turn into a single read is *ignored* rather + than rejected. RFC 9110 §14.2 requires a server to ignore a Range whose + unit it does not recognize, and permits ignoring one it cannot parse; in + both cases the correct answer is the full representation, not 416. + Answering 416 would tell a client the object is unreadable when it is + merely the request that was unsupported -- and a client coalescing two + chunk reads into one multi-range request would take that at face value. + + 416 is reserved for a well-formed range that genuinely names nothing. + + Parameters + ---------- + range_header : str + The value of the Range header, e.g. ``"bytes=0-99"`` or ``"bytes=-100"``. + + Returns + ------- + ByteRequest or _RangeVerdict + A ``RangeByteRequest``, ``OffsetByteRequest``, or ``SuffixByteRequest`` + for a readable range, otherwise the verdict to apply. + """ + if not range_header.startswith("bytes="): + # An unrecognized range unit; RFC 9110 §14.2 says MUST ignore. + return _RangeVerdict.IGNORE + range_spec = range_header[len("bytes=") :] + if "," in range_spec: + # A multipart range. Legal to send, and legal to answer with the whole + # representation; this server does not build multipart/byteranges. + return _RangeVerdict.IGNORE + + if range_spec.startswith("-"): + # suffix request: bytes=-N + suffix = _parse_int(range_spec[1:]) + if suffix is None: + return _RangeVerdict.IGNORE + if suffix == 0: + # "the last zero bytes" names nothing. + return _RangeVerdict.UNSATISFIABLE + return SuffixByteRequest(suffix=min(suffix, _MAX_BYTE_POS)) + + parts = range_spec.split("-", 1) + if len(parts) != 2: + return _RangeVerdict.IGNORE + start_str, end_str = parts + start = _parse_int(start_str) + if start is None: + return _RangeVerdict.IGNORE + if start > _MAX_BYTE_POS: + # No object can be this long, so the range starts past every end. + return _RangeVerdict.UNSATISFIABLE + if end_str == "": + # offset request: bytes=N- + return OffsetByteRequest(offset=start) + end_pos = _parse_int(end_str) + if end_pos is None: + return _RangeVerdict.IGNORE + # HTTP end is inclusive, ByteRequest end is exclusive. A last-byte-pos at + # or past the end of the object is satisfiable -- RFC 9110 §14.1.2 says to + # clamp it -- so an oversized bound is capped rather than refused. + end = min(end_pos, _MAX_BYTE_POS - 1) + 1 + if start >= end: + # An inverted range like "bytes=5-2" is unsatisfiable, not a read + # of negative length. + return _RangeVerdict.UNSATISFIABLE + return RangeByteRequest(start=start, end=end) + + +def _is_drive_qualified(path: str) -> bool: + """Whether *path* carries a drive or UNC prefix that would discard a store root. + + A drive-qualified key such as `C:/Windows`, or the drive-relative `a:b`, + replaces the root it is joined to rather than extending it. This is + rejected on every platform, not just Windows: the check is a string-level + gate in front of an arbitrary `Store`, and this package cannot know how a + given implementation resolves keys. + + The cost is that a node whose *first* path segment looks like `:...` + is unreachable -- `ntpath` treats any single character before a colon as + a drive, so there is no safe subset to admit. Such names are legal but + rare, and later segments are unaffected (`sub/a:b` is served normally). + + Parameters + ---------- + path : str + The candidate key, with separators already folded to `/`. + + Returns + ------- + bool + """ + return ntpath.splitdrive(path)[0] != "" + + +def _names_nothing(exc: OSError) -> bool: + """Whether an `OSError` answers about the *name*, rather than reporting failure. + + `ENAMETOOLONG` is the store saying no such name is expressible here. That + is an answer about the key -- nothing can be stored under it, so a miss is + honest -- and it is unreachable for real data, because `encode_chunk_key` + never produces a segment near a filesystem's length limit. Answering 404 + therefore cannot make a reader substitute fill values over a chunk that + exists, and it keeps a client from turning a freely chosen key into a 5xx. + + Every other `errno` describes a failure to complete the operation and must + surface as one. `EINVAL` was accepted here and was the dangerous case: it + is POSIX's catch-all, reachable on a perfectly ordinary short key through + a bad seek or an unsupported filesystem feature. Under the v3 spec an + absent chunk is an uninitialized one, so reporting such a failure as 404 + has a correct reader write fill values over data that is merely + unreadable. When in doubt the store's own signal is the one to trust: + `None` means absent, a raised error means the request could not be + answered. + + Parameters + ---------- + exc : OSError + The error raised by the store. + + Returns + ------- + bool + """ + return exc.errno == errno.ENAMETOOLONG + + +def _content_range(byte_range: RangeByteRequest | OffsetByteRequest, length: int) -> str: + """Build a `Content-Range` value for a 206 response. + + Parameters + ---------- + byte_range : RangeByteRequest or OffsetByteRequest + The range that was served. A suffix request is resolved to an absolute + range before reaching here, because RFC 9110 §15.3.7 requires every + single-part 206 to carry a `Content-Range` and a suffix's first-byte + position is not knowable without the object's size. + length : int + The number of bytes actually returned. + + Returns + ------- + str + A `bytes -/*` value. + """ + start = byte_range.start if isinstance(byte_range, RangeByteRequest) else byte_range.offset + # The total length is unknown here; RFC 9110 permits "*" in its place. + return f"bytes {start}-{start + length - 1}/*" + + +async def _resolve_suffix( + store: Store, path: str, byte_range: SuffixByteRequest +) -> RangeByteRequest | _RangeVerdict: + """Turn a suffix request into an absolute range using the object's size. + + A suffix range names its bytes relative to an end this server does not + otherwise need to know. Resolving it here is what lets the 206 carry a + `Content-Range`, which RFC 9110 requires and which a caller reading a + shard index needs in order to locate what it was given. + """ + try: + size = await store.getsize(path) + except FileNotFoundError: + return _RangeVerdict.UNSATISFIABLE + if size == 0: + return _RangeVerdict.UNSATISFIABLE + # A suffix longer than the object is satisfiable and yields the whole + # object, per RFC 9110 §14.1.2. + return RangeByteRequest(start=max(0, size - byte_range.suffix), end=size) + + +_JSON_BASENAMES = ( + array_metadata_keys(2) + | array_metadata_keys(3) + | group_metadata_keys(2) + | group_metadata_keys(3) +) +"""Metadata documents that are JSON, for every zarr format. + +Derived from the same tables that decide which keys a node owns, so a v2 +array's `.zarray` is typed as JSON rather than as opaque bytes -- and adding a +document in one place cannot leave the media type behind in the other. +""" + + +def content_type_for(path: str) -> str: + """Media type for a store key, chosen by its basename.""" + if path.rsplit("/", 1)[-1] in _JSON_BASENAMES: + return "application/json" + return "application/octet-stream" + + +async def _head_response(store: Store, path: str, content_type: str) -> Response: + """Answer a HEAD without transferring the value. + + A HEAD body is discarded at the wire, so routing HEAD through the GET + handler reads the whole object -- megabytes of chunk or shard -- to report + a length. `Store.getsize` is a `stat` on a filesystem store and an + info/HEAD call on a remote one. + """ + from starlette.responses import Response + + try: + size = await store.getsize(path) + except FileNotFoundError: + return Response(status_code=404) + except OSError as exc: + if not _names_nothing(exc): + raise + return Response(status_code=404) + return Response(status_code=200, media_type=content_type, headers={"Content-Length": str(size)}) + + +async def _get_response( + store: Store, + path: str, + byte_range: RangeByteRequest | OffsetByteRequest | None = None, +) -> Response: + """Fetch a key from the store and return an HTTP response.""" + from starlette.responses import Response + + proto = cpu.buffer_prototype + content_type = content_type_for(path) + + try: + buf = await store.get(path, proto, byte_range=byte_range) + except (MemoryError, OverflowError): + # The client's last-byte-pos is wider than the store can materialize + # -- it sizes its read from the range, not from the object. RFC 9110 + # §14.1.2 makes a last-byte-pos at or past the end of the object + # satisfiable and clamps it to the end, so re-read from the same start + # to EOF, which is what the clamped range denotes. Refusing with 416 + # would deny a request that is merely over-wide, and a client asking + # for "from here to well past the end" is asking a normal question. + if not isinstance(byte_range, RangeByteRequest): + raise + byte_range = OffsetByteRequest(offset=byte_range.start) + buf = await store.get(path, proto, byte_range=byte_range) + except OSError as exc: + if not _names_nothing(exc): + # A real I/O failure, which must not be reported as a miss. Under + # the v3 spec an absent chunk is an uninitialized one, and a + # reader is right to substitute the array's fill value for it -- + # so 404 asserts something about the store's contents. An + # unreadable chunk is not an uninitialized chunk, and answering + # 404 would have a correct client silently materialize fill + # values over data that exists. + raise + return Response(status_code=404) + if buf is None: + return Response(status_code=404) + + if byte_range is None: + return Response(content=buf.to_bytes(), status_code=200, media_type=content_type) + + body = buf.to_bytes() + if len(body) == 0: + # The range lies wholly beyond the end of the object. + return Response(status_code=416) + + headers = {"Content-Range": _content_range(byte_range, len(body))} + return Response(content=body, status_code=206, media_type=content_type, headers=headers) + + +async def _handle_request(request: Request) -> Response: + """Handle a request, optionally filtering by node validity.""" + from starlette.responses import Response + + store: Store = request.app.state.store + node: Array[Any] | Group | None = request.app.state.node + prefix: str = request.app.state.prefix + path = request.path_params.get("path", "") + + # Reject non-canonical / traversal-prone keys before touching the store. + # Starlette percent-decodes path params, so "..%2f" arrives as a literal + # ".." segment and "%2f"-encoded leading slashes arrive as an empty leading + # segment (making the key absolute, which escapes a filesystem store root). + # Backslashes are separators on Windows and drive-qualified or + # root-relative keys discard a filesystem store's root entirely, so fold + # separators before checking segments -- mirroring zarr's normalize_path + # (src/zarr/storage/_utils.py) plus a drive check it doesn't need. Legitimate + # zarr keys never contain empty, ".", or ".." segments, or a drive letter. + segments = path.replace("\\", "/").split("/") + if any(segment in ("", ".", "..") for segment in segments) or _is_drive_qualified(path): + return Response(status_code=404) + + # A NUL can never appear in a store key, and reaches the filesystem layer + # as a raised error rather than a miss. Rejecting it here keeps that out + # of the store, so the store's own errors always mean real I/O trouble. + if "\x00" in path: + return Response(status_code=404) + + # If serving a node, validate the key before touching the store. Group + # validation opens children through zarr's synchronous API, which drives + # the store to completion and would otherwise block the event loop for + # the duration -- serializing every concurrent request behind it, and + # outlasting the shutdown timeout. + if node is not None and not await asyncio.to_thread(is_valid_node_key, node, path): + return Response(status_code=404) + + # Resolve the full store key by prepending the node's prefix. + store_key = f"{prefix}/{path}" if prefix else path + + if request.method == "PUT": + if store.read_only: + # The store will refuse this with a ValueError from deep inside + # `set`, which is a 500 -- a server fault. Refusing to write to a + # read-only store is not a fault, it is the answer. + return Response(status_code=403) + + max_body_size: int | None = request.app.state.max_body_size + if max_body_size is None: + body = await request.body() + else: + declared = request.headers.get("content-length") + if declared is not None and declared.isdigit() and int(declared) > max_body_size: + return Response(status_code=413) + + # Read incrementally and stop at the cap. `request.body()` would + # buffer the whole body first, which a chunked request can use to + # exceed the cap by any amount before it is ever checked. + chunks: list[bytes] = [] + received = 0 + async for chunk in request.stream(): + received += len(chunk) + if received > max_body_size: + return Response(status_code=413) + chunks.append(chunk) + body = b"".join(chunks) + + buf = cpu.buffer_prototype.buffer.from_bytes(body) + try: + await store.set(store_key, buf) + except OSError as exc: + if not _names_nothing(exc): + # A real write failure -- a full disk, a read-only mount, a + # permissions problem. Reporting it as 404 would tell the + # client the write is pointless rather than failed. + raise + return Response(status_code=404) + return Response(status_code=204) + + if request.method == "HEAD": + # A HEAD body is discarded at the wire, so reading the value to build + # one transfers the whole object to answer a question about its size. + # `getsize` is a stat on a filesystem store and a HEAD/info call on a + # remote one. + return await _head_response(store, store_key, content_type_for(path)) + + range_header = request.headers.get("range") + byte_range: RangeByteRequest | OffsetByteRequest | None = None + if range_header is not None: + parsed = _parse_range_header(range_header) + if parsed is _RangeVerdict.UNSATISFIABLE: + return Response(status_code=416) + if isinstance(parsed, SuffixByteRequest): + parsed = await _resolve_suffix(store, store_key, parsed) + if parsed is _RangeVerdict.UNSATISFIABLE: + return Response(status_code=416) + # _RangeVerdict.IGNORE falls through with byte_range still None, which + # serves the full representation with 200. + if not isinstance(parsed, _RangeVerdict): + byte_range = parsed + + return await _get_response(store, store_key, byte_range) + + +def _make_starlette_app( + *, + methods: AbstractSet[HTTPMethod] | None = None, + cors_options: CorsOptions | None = None, +) -> Starlette: + """Create a Starlette app with the request handler. + + Raises + ------ + ValueError + If `methods` contains anything outside `GET`, `PUT`, and `HEAD`. + """ + from starlette.applications import Starlette + from starlette.middleware.cors import CORSMiddleware + from starlette.routing import Route + + if methods is None: + methods = READ_ONLY_HTTP_METHODS + + # An empty set must not reach Starlette: `Route` treats a falsy `methods` + # as "match every method", so asking for no methods would serve them all. + if not methods: + raise ValueError( + "methods must name at least one HTTP method; " + f"accepted methods are {', '.join(sorted(_SUPPORTED_METHODS))}." + ) + + unsupported = sorted(set(methods) - _SUPPORTED_METHODS) + if unsupported: + raise ValueError( + f"Unsupported HTTP method(s): {', '.join(unsupported)}. " + f"Accepted methods are {', '.join(sorted(_SUPPORTED_METHODS))}." + ) + + app = Starlette( + routes=[Route("/{path:path}", _handle_request, methods=list(methods))], + ) + + if cors_options is not None: + # Typed loosely on purpose: unpacking a merged TypedDict loses the + # per-key types, so the looseness is contained to this block rather + # than spread across casts at each use. + merged: dict[str, Any] = {**_CORS_DEFAULTS, **cors_options} + if "allow_methods" in merged: + # Only when the caller said something. Absent, Starlette's own + # `GET`-only default stands: widening it to everything served + # would newly advertise `PUT` cross-origin on a write-enabled app + # that never asked for it. + merged["allow_methods"] = _reconcile_allow_methods( + merged["allow_methods"], served=_served_methods(methods) + ) + app.add_middleware( + CORSMiddleware, + # Our defaults first, so a key the caller supplied wins outright + # rather than being merged into -- an explicit `expose_headers: []` + # means "expose nothing", not "expose our default". + **merged, + ) + return app + + +def _reject_writes_to_a_read_only_store( + store: Store, methods: AbstractSet[HTTPMethod] | None +) -> None: + """Refuse a configuration whose writes can never succeed. + + A store's `read_only` is fixed when it is built, so asking to serve `PUT` + from one is a contradiction that would only reveal itself as a 403 on the + first write a client attempts -- possibly long after deployment, and to + the client rather than to whoever misconfigured it. Saying so at + construction matches how unsupported `methods` and contradictory + `cors_options` are already handled. + + Raises + ------ + ValueError + If `methods` asks for `PUT` on a read-only store. + """ + if methods is not None and "PUT" in methods and store.read_only: + raise ValueError( + "methods asks for PUT, but the store is read-only, so no write " + "could ever succeed. Drop PUT to serve reads, or pass a writable " + "store (`store.with_read_only(False)`)." + ) + + +def _served_methods(methods: AbstractSet[HTTPMethod]) -> frozenset[str]: + """The methods the route will actually answer. + + Starlette adds `HEAD` to any route that serves `GET`, which RFC 9110 + §9.3.2 asks of every origin server, so `HEAD` is served whenever `GET` is + whether or not it was named. + """ + served = set(methods) + if "GET" in served: + served.add("HEAD") + return frozenset(served) + + +def _reconcile_allow_methods(allow_methods: list[str], *, served: frozenset[str]) -> list[str]: + """Check `cors_options["allow_methods"]` against what the route serves. + + An advertised method the route rejects is a promise the server cannot + keep: a browser caches the preflight and every later cross-origin call + fails with 405 after a successful handshake. The reverse is worse -- the + same silence lets `allow_methods=["*"]` on a write-enabled app hand every + origin on the internet write access, which is exactly the footgun the + `methods` validation above exists to prevent. + + `"*"` expands to what is actually served rather than being rejected: it + is the idiomatic spelling of "everything this app does", and the app + cannot do more than it serves. + """ + if "*" in allow_methods: + return sorted(served) + + unserved = sorted(set(allow_methods) - served) + if unserved: + raise ValueError( + f"cors_options['allow_methods'] advertises {', '.join(unserved)}, " + f"which this app does not serve (it serves {', '.join(sorted(served))}). " + "A browser would cache that preflight and every such request would " + "then fail with 405." + ) + return list(allow_methods) + + +def _build_server( + app: Starlette, + *, + host: str, + port: int | Literal["auto"], + shutdown_timeout: int, + uvicorn_options: Mapping[str, object] | None, +) -> tuple[uvicorn.Server, dict[str, object], socket.socket | None]: + """Configure a `uvicorn.Server` for *app*, and report how it will bind. + + Returns the options actually used -- a key from `uvicorn_options` may have + replaced one passed here -- and, for `port="auto"`, the socket already + bound on the caller's behalf, which must be handed to `Server.run`. + """ + import uvicorn + + options: dict[str, object] = { + "host": host, + "port": port, + "timeout_graceful_shutdown": shutdown_timeout, + } + if uvicorn_options is not None: + options.update(uvicorn_options) + + sock: socket.socket | None = None + if options.get("port") == AUTO_PORT: + if _binds_without_a_port(options): + # A uds or fd bind ignores host and port; leave a valid int in + # place of the sentinel so `Config` still type-checks. + options["port"] = DEFAULT_PORT + else: + # Bind here rather than probing and handing uvicorn a port number: + # probing would release the port before uvicorn claimed it, which + # is the bind-then-close race that makes "find a free port" helpers + # flaky. Holding the socket means nothing can take it in between. + sock = _bind_preferred_or_free(str(options["host"]), DEFAULT_PORT) + # Keep Config agreeing with reality, so uvicorn's own "running on + # ..." line names the port it is really serving. + options["port"] = sock.getsockname()[1] + + # uvicorn.Config's parameters are individually typed and there are ~50 of + # them; `Mapping[str, object]` is the honest type for the public argument, + # so the cast is confined to the call itself. + return uvicorn.Server(uvicorn.Config(app, **cast("dict[str, Any]", options))), options, sock + + +def _binds_without_a_port(options: Mapping[str, object]) -> bool: + """Whether these options bind something other than a TCP host and port.""" + return options.get("uds") is not None or options.get("fd") is not None + + +def _bind_preferred_or_free(host: str, preferred: int) -> socket.socket: + """Bind *preferred* on *host* if it is free, otherwise any free port. + + The address family comes from `getaddrinfo` rather than being assumed: + hard-coding `AF_INET` would fail for an IPv6 host such as ``"::1"``. + """ + for candidate in (preferred, 0): + family, socktype, proto, _, sockaddr = socket.getaddrinfo( + host, candidate, type=socket.SOCK_STREAM + )[0] + sock = socket.socket(family, socktype, proto) + sock.setsockopt(socket.SOL_SOCKET, socket.SO_REUSEADDR, 1) + try: + sock.bind(sockaddr) + except OSError: + sock.close() + if candidate == 0: + # Nothing is free, which is a real failure rather than a + # reason to keep looking. + raise + _LOGGER.info( + "port %d is in use; binding a free port instead. Pass an " + "explicit port to require a particular one.", + preferred, + ) + continue + return sock + raise AssertionError("unreachable") # pragma: no cover + + +def serve( + app: Starlette, + *, + host: str = "127.0.0.1", + port: int | Literal["auto"] = AUTO_PORT, + shutdown_timeout: int = 5, + uvicorn_options: Mapping[str, object] | None = None, +) -> None: + """Run an ASGI app under Uvicorn, blocking until it is stopped. + + Returns only when the server stops, so this is the shape for a process + whose job is to serve -- a script, a container entrypoint. Use + :func:`serve_background` when the caller has more to do. + + Build the app first with :func:`store_app` or :func:`node_app`, or compose + several of them; what an app serves is settled when it is built, and this + only decides how it runs. + + .. code-block:: python + + serve(store_app(store), host="0.0.0.0", port=8000) + + Parameters + ---------- + app : Starlette + The ASGI app to run. + host : str, optional + The host to bind to. Defaults to ``"127.0.0.1"``. + port : int, optional + The port to bind to. Defaults to ``8000``. + shutdown_timeout : int, optional + Seconds to wait for in-flight requests to finish gracefully when the + server is shut down, via uvicorn's ``timeout_graceful_shutdown``. + Defaults to ``5``. + uvicorn_options : Mapping[str, object], optional + Extra options passed straight to `uvicorn.Config`, merged over the + ones set here (`host`, `port`, `timeout_graceful_shutdown`), so a + caller key wins. This is the escape hatch for anything uvicorn can do + that this signature does not name -- TLS via `ssl_keyfile` / + `ssl_certfile`, `proxy_headers` and `forwarded_allow_ips` behind a + reverse proxy, `root_path` when mounted under a prefix, `log_level`, + `limit_concurrency`, or a `uds` / `fd` bind. + """ + server, _, sock = _build_server( + app, + host=host, + port=port, + shutdown_timeout=shutdown_timeout, + uvicorn_options=uvicorn_options, + ) + server.run(sockets=[sock] if sock is not None else None) + + +def serve_background( + app: Starlette, + *, + host: str = "127.0.0.1", + port: int | Literal["auto"] = AUTO_PORT, + shutdown_timeout: int = 5, + uvicorn_options: Mapping[str, object] | None = None, +) -> BackgroundServer: + """Start an ASGI app under Uvicorn in a daemon thread and return at once. + + Returns once the socket is listening, so the next statement can use the + server. The returned handle is also a context manager: + + .. code-block:: python + + with serve_background(node_app(array)) as server: + httpx.get(f"{server.url}/zarr.json") + + In a notebook, where the server must outlive the cell that started it, + keep the handle instead and call :meth:`BackgroundServer.shutdown` later. + + Parameters + ---------- + app : Starlette + The ASGI app to run. + host : str, optional + The host to bind to. Defaults to ``"127.0.0.1"``. + port : int, optional + The port to bind to. Defaults to ``0``, which asks the OS for a free + one -- unlike :func:`serve`, whose caller usually needs a port others + already know. A background server is normally reached through + :attr:`BackgroundServer.url`, and a fixed default would make starting + a second one, or re-running a notebook cell, fail on a port collision. + shutdown_timeout : int, optional + Seconds to wait for in-flight requests to finish gracefully, both for + uvicorn's ``timeout_graceful_shutdown`` and for the wait + :meth:`BackgroundServer.shutdown` uses before forcing the thread + closed. Defaults to ``5``. + uvicorn_options : Mapping[str, object], optional + Extra options passed straight to `uvicorn.Config`, merged over the + ones set here so a caller key wins. See :func:`serve`. Binding + somewhere other than a TCP host and port leaves + :attr:`BackgroundServer.url` as ``None``. + + Returns + ------- + BackgroundServer + A handle for the running server. + + Raises + ------ + RuntimeError + If the server does not start -- most often because the port is + already in use. + """ + server, options, sock = _build_server( + app, + host=host, + port=port, + shutdown_timeout=shutdown_timeout, + uvicorn_options=uvicorn_options, + ) + + # uvicorn skips signal-handler installation off the main thread + # (Server.capture_signals), so no workaround is needed here. + thread = threading.Thread( + target=partial(server.run, sockets=[sock] if sock is not None else None), daemon=True + ) + thread.start() + + deadline = time.monotonic() + _STARTUP_TIMEOUT + while not server.started: + if not thread.is_alive(): + # uvicorn logs the underlying error and calls sys.exit, which in a + # thread ends it without surfacing anything to the caller. The + # overwhelmingly common cause is a port already in use. + raise RuntimeError( + f"Server thread exited before startup completed; {host}:{port} " + "may already be in use. See the server log for the cause." + ) + if time.monotonic() > deadline: + # The thread is still alive here, unlike the branch above, and it + # is about to finish starting. Raising without stopping it would + # leave a server bound to the port with no handle to shut it down + # -- a daemon thread serving for the rest of the process, and a + # retry on the same port failing with the other error above. + server.should_exit = True + server.force_exit = True + thread.join(timeout=_STARTUP_ABANDON_TIMEOUT) + raise RuntimeError( + f"Server failed to start within {_STARTUP_TIMEOUT:g} seconds; " + "it has been signalled to stop." + ) + time.sleep(0.01) + + # Report the port the socket actually bound rather than the one asked for, + # so `port=0` ("pick a free port") yields a usable `url`. A unix-socket or + # file-descriptor bind has no host and port at all, so both stay None and + # `url` reports None rather than naming an address nothing is listening on. + bound_port: int | None = None + for bound in server.servers: + for sock in bound.sockets: + sockname = sock.getsockname() + if isinstance(sockname, tuple) and len(sockname) >= 2: + bound_port = int(sockname[1]) + break + break + + # The host is taken from the request rather than the socket: a wildcard + # bind reports "0.0.0.0", which is not an address a client can connect to. + requested_host = options.get("host") + bound_host = ( + str(requested_host) if bound_port is not None and requested_host is not None else None + ) + + return BackgroundServer( + server, + thread, + host=bound_host, + port=bound_port, + scheme="https" if server.config.is_ssl else "http", + shutdown_timeout=shutdown_timeout, + ) + + +def store_app( + store: Store, + *, + methods: AbstractSet[HTTPMethod] | None = None, + cors_options: CorsOptions | None = None, + max_body_size: int | None = DEFAULT_MAX_BODY_SIZE, +) -> Starlette: + """Create a Starlette ASGI app that serves every key in a zarr ``Store``. + + Parameters + ---------- + store : Store + The zarr store to serve. + methods : set of HTTPMethod, optional + The HTTP methods to accept: any of `"GET"`, `"HEAD"`, and `"PUT"`. + Defaults to `{"GET"}`, which also serves `HEAD`. Passing any other + method raises `ValueError`. + cors_options : CorsOptions, optional + If provided, CORS middleware will be added with the given options. + max_body_size : int or None, optional + Largest `PUT` body to accept, in bytes; larger requests get a 413. + `Store.set` takes a whole `Buffer`, so bodies cannot be streamed and + are held in memory in full. Defaults to `DEFAULT_MAX_BODY_SIZE`; + pass `None` to lift the cap. + + Returns + ------- + Starlette + An ASGI application. + """ + _reject_writes_to_a_read_only_store(store, methods) + app = _make_starlette_app(methods=methods, cors_options=cors_options) + app.state.store = store + app.state.node = None + app.state.prefix = "" + app.state.max_body_size = max_body_size + return app + + +def node_app( + node: Array[Any] | Group, + *, + methods: AbstractSet[HTTPMethod] | None = None, + cors_options: CorsOptions | None = None, + max_body_size: int | None = DEFAULT_MAX_BODY_SIZE, +) -> Starlette: + """Create a Starlette ASGI app that serves only the keys belonging to a + zarr ``Array`` or ``Group``. + + For an ``Array``, the served keys are the metadata document(s) and all + chunk (or shard) keys whose coordinates fall within the array's grid. + + For a ``Group``, the served keys are the group's own metadata plus any + path that resolves through the group's members to a valid array metadata + document or chunk key. + + Requests for keys outside this set receive a 404 response, even if the + underlying store contains data at that path. + + Parameters + ---------- + node : Array or Group + The zarr array or group to serve. + methods : set of HTTPMethod, optional + The HTTP methods to accept: any of `"GET"`, `"HEAD"`, and `"PUT"`. + Defaults to `{"GET"}`, which also serves `HEAD`. Passing any other + method raises `ValueError`. + cors_options : CorsOptions, optional + If provided, CORS middleware will be added with the given options. + max_body_size : int or None, optional + Largest `PUT` body to accept, in bytes; larger requests get a 413. + `Store.set` takes a whole `Buffer`, so bodies cannot be streamed and + are held in memory in full. Defaults to `DEFAULT_MAX_BODY_SIZE`; + pass `None` to lift the cap. + + Returns + ------- + Starlette + An ASGI application. + """ + _reject_writes_to_a_read_only_store(node.store_path.store, methods) + app = _make_starlette_app(methods=methods, cors_options=cors_options) + app.state.store = node.store_path.store + app.state.node = node + app.state.prefix = node.store_path.path + app.state.max_body_size = max_body_size + return app diff --git a/packages/zarr-http-server/src/zarr_http_server/py.typed b/packages/zarr-http-server/src/zarr_http_server/py.typed new file mode 100644 index 0000000000..e69de29bb2 diff --git a/packages/zarr-http-server/tests/conftest.py b/packages/zarr-http-server/tests/conftest.py new file mode 100644 index 0000000000..84694b42ba --- /dev/null +++ b/packages/zarr-http-server/tests/conftest.py @@ -0,0 +1,30 @@ +from __future__ import annotations + +from typing import TYPE_CHECKING, Literal + +import pytest +from zarr.storage import MemoryStore + +if TYPE_CHECKING: + from zarr.abc.store import Store + +ZarrFormat = Literal[2, 3] + + +@pytest.fixture +def store(request: pytest.FixtureRequest) -> Store: + """Store fixture resolved via indirect parametrization.""" + if request.param != "memory": + raise ValueError(f"unsupported store param: {request.param!r}") + return MemoryStore() + + +@pytest.fixture(params=(2, 3), ids=["zarr2", "zarr3"]) +def zarr_format(request: pytest.FixtureRequest) -> ZarrFormat: + """Zarr format version fixture, parametrized over v2 and v3.""" + if request.param == 2: + return 2 + elif request.param == 3: + return 3 + msg = f"Invalid zarr format requested. Got {request.param}, expected one of (2, 3)." + raise ValueError(msg) diff --git a/packages/zarr-http-server/tests/test_examples.py b/packages/zarr-http-server/tests/test_examples.py new file mode 100644 index 0000000000..20a5d5b1b0 --- /dev/null +++ b/packages/zarr-http-server/tests/test_examples.py @@ -0,0 +1,60 @@ +"""The shipped examples must keep working. + +An example that has quietly rotted is worse than no example: it is the first +thing a new user copies. These run the real files rather than a paraphrase of +them, so a signature change or a behavior change fails here rather than in +someone's notebook. +""" + +from __future__ import annotations + +import pathlib +import runpy + +import pytest + +EXAMPLES = pathlib.Path(__file__).resolve().parent.parent / "examples" +NOTEBOOK = EXAMPLES / "serve_notebook.ipynb" +SCRIPT = EXAMPLES / "serve.py" + + +@pytest.mark.parametrize("path", [NOTEBOOK, SCRIPT], ids=["notebook", "script"]) +def test_example_exists(path: pathlib.Path) -> None: + """Guards the paths above: a renamed or moved example would otherwise turn + its execution test into a skip, or a no-op, that nobody notices.""" + assert path.is_file(), f"missing example at {path}" + + +def test_serve_script_runs() -> None: + """Run examples/serve.py top to bottom. + + In-process rather than as a subprocess: the script's inline uv metadata + resolves `zarr-http-server` from git, so `uv run` on it would test whatever + is on main instead of the working tree. + """ + runpy.run_path(str(SCRIPT), run_name="__main__") + + +def test_serve_notebook_executes() -> None: + """Run every cell in a real kernel. + + The notebook asserts its own expectations -- status codes, byte ranges, + that a PUT is refused, that the port is closed after `shutdown()` -- so + this is not merely a check that nothing raised. `NotebookClient.execute` + defaults to ``allow_errors=False``, so any failed cell raises + `CellExecutionError` and fails this test with that cell's traceback. + """ + nbformat = pytest.importorskip("nbformat") + nbclient = pytest.importorskip("nbclient") + pytest.importorskip("ipykernel", reason="a kernel is needed to execute the notebook") + + notebook = nbformat.read(NOTEBOOK, as_version=4) + + # Run with the notebook's own directory as cwd, so any relative path it + # uses means the same thing as when a reader opens it. + nbclient.NotebookClient( + notebook, + timeout=300, + kernel_name="python3", + resources={"metadata": {"path": str(EXAMPLES)}}, + ).execute() diff --git a/packages/zarr-http-server/tests/test_properties.py b/packages/zarr-http-server/tests/test_properties.py new file mode 100644 index 0000000000..ff54392dfc --- /dev/null +++ b/packages/zarr-http-server/tests/test_properties.py @@ -0,0 +1,580 @@ +"""Property-based tests driven against a real HTTP endpoint. + +Every test here talks to an actual uvicorn server over a socket, not to an +in-process ASGI client, so the properties cover the parts of the stack that +only exist on the wire: header parsing, method dispatch, and status codes. + +Each property checks **two** things after a request -- the response, and the +state of the backing store. That pairing is the point. A server can answer +correctly and corrupt the store, or refuse a request and write anyway, and a +response-only assertion sees neither. The bug that motivated this module did +exactly that: a `PUT` to a non-canonically spelled chunk key ("c/00/00" +instead of "c/0/0") answered `204 No Content` and stored the body under a key +no reader ever looks up, so the client saw success and the data was invisible. + +The vocabulary below splits keys into two families: + +* **in-band** -- keys the served node genuinely owns: its metadata documents + and the canonical spelling of each chunk key in its grid. These must be + served, and writes to them must be visible to a zarr reader. +* **out-of-band** -- everything else: non-canonical spellings of a valid + chunk key, coordinates outside the grid, traversal attempts, and keys + belonging to a sibling node. These must be refused *and* must leave the + store byte-for-byte unchanged. +""" + +from __future__ import annotations + +import re +from dataclasses import dataclass +from typing import TYPE_CHECKING, Any, Literal +from urllib.parse import quote + +import httpx +import numpy as np +import pytest +import zarr +from hypothesis import assume, given, settings +from hypothesis import strategies as st +from zarr.buffer import cpu +from zarr.core.sync import sync + +from zarr_http_server import node_app, serve_background, store_app +from zarr_http_server._keys import _shard_grid_shape + +if TYPE_CHECKING: + from collections.abc import Iterator + + from zarr import Array + from zarr.abc.store import Store + +# Real HTTP round trips are slower and jumpier than hypothesis' default +# deadline allows, and a CI runner under load makes that worse. +_HTTP = settings(deadline=None, max_examples=50) + +# An uncompressed array so a chunk's bytes are exactly its raw values: a PUT +# body of the right length is a legitimate chunk, which lets these tests +# assert that a write is readable through a zarr client rather than merely +# present in the store. +_SHAPE = (6, 4) +_CHUNKS = (2, 2) +_DTYPE = "int32" + + +@dataclass(frozen=True) +class Served: + """A running server plus the handles needed to reason about its keys.""" + + url: str + store: Store + array: Array[Any] + kind: Literal["store", "node"] + + http_prefix: str + """Prepended to an array-relative key to form the request path.""" + + store_prefix: str + """Prepended to an array-relative key to form the backing store key.""" + + def path(self, array_relative_key: str) -> str: + return f"{self.http_prefix}{array_relative_key}" + + def store_key(self, array_relative_key: str) -> str: + return f"{self.store_prefix}{array_relative_key}" + + +def _snapshot(store: Store) -> dict[str, bytes]: + """Every key in *store* mapped to its bytes. + + Comparing two snapshots is how these tests assert that a rejected request + changed nothing -- not just that it added no key, but that it modified + none either. + """ + + async def _read() -> dict[str, bytes]: + out: dict[str, bytes] = {} + async for key in store.list(): + buf = await store.get(key, cpu.buffer_prototype) + if buf is not None: + out[key] = buf.to_bytes() + return out + + return sync(_read()) + + +@pytest.fixture( + scope="module", + params=[ + ("store", 2, "memory"), + ("store", 3, "memory"), + ("node", 2, "memory"), + ("node", 3, "memory"), + # LocalStore reads through the filesystem, which sizes its read from + # the range rather than from the object and so raises on an over-wide + # one. MemoryStore just slices a `bytes` and is happy with any bound, + # so a memory-only matrix cannot tell a clamped range from a refused + # one -- the store backend is part of what these properties test. + ("store", 3, "local"), + ("node", 3, "local"), + ], + ids=["store-v2", "store-v3", "node-v2", "node-v3", "store-v3-local", "node-v3-local"], +) +def served( + request: pytest.FixtureRequest, tmp_path_factory: pytest.TempPathFactory +) -> Iterator[Served]: + """One real server per (app kind, zarr format, store backend). + + Module-scoped because hypothesis drives hundreds of requests per test and + a server per example would dominate the runtime. `port=0` lets the OS + choose the port and `server.url` reports what it actually bound, which + avoids the bind-then-close race of picking a port up front. + """ + kind, zarr_format, backend = request.param + + store: Store + if backend == "local": + root_dir = tmp_path_factory.mktemp(f"{kind}-v{zarr_format}") + store = zarr.storage.LocalStore(root_dir) + else: + store = zarr.storage.MemoryStore() + root = zarr.open_group(store, mode="w", zarr_format=zarr_format) + array = root.create_array( + "inside", shape=_SHAPE, chunks=_CHUNKS, dtype=_DTYPE, compressors=None + ) + array[:] = np.arange(int(np.prod(_SHAPE)), dtype=_DTYPE).reshape(_SHAPE) + # A sibling the node_app must never serve, and whose keys therefore make + # good out-of-band probes. + sibling = root.create_array( + "outside", shape=_CHUNKS, chunks=_CHUNKS, dtype=_DTYPE, compressors=None + ) + sibling[:] = 1 + + if kind == "node": + server = serve_background(node_app(array, methods={"GET", "PUT"}), host="127.0.0.1", port=0) + http_prefix = "" + else: + server = serve_background( + store_app(store, methods={"GET", "PUT"}), host="127.0.0.1", port=0 + ) + http_prefix = "inside/" + assert server is not None + + try: + yield Served( + url=server.url, + store=store, + array=array, + kind=kind, + http_prefix=http_prefix, + store_prefix="inside/", + ) + finally: + server.shutdown() + + +def _grid(array: Array[Any]) -> tuple[int, ...]: + return _shard_grid_shape(array) + + +@st.composite +def chunk_coords(draw: st.DrawFn, array: Array[Any]) -> tuple[int, ...]: + """Coordinates of a chunk that exists in *array*'s storage grid.""" + return tuple(draw(st.integers(min_value=0, max_value=g - 1)) for g in _grid(array)) + + +@st.composite +def out_of_grid_coords(draw: st.DrawFn, array: Array[Any]) -> tuple[int, ...]: + """Coordinates outside the grid, so the key is well-formed but names nothing.""" + grid = _grid(array) + axis = draw(st.integers(min_value=0, max_value=len(grid) - 1)) + coords = list(draw(chunk_coords(array))) + coords[axis] = draw(st.integers(min_value=grid[axis], max_value=grid[axis] + 50)) + return tuple(coords) + + +# The confusability with ASCII digits is the point: `int()` accepts these as +# decimal digits, so they name a different store key while decoding to the +# same coordinate. That is the defect these strategies probe for. +_ARABIC_INDIC = "٠١٢٣٤٥٦٧٨٩" +_FULLWIDTH = "０１２３４５６７８９" # noqa: RUF001 + + +def _respellings(digits: str) -> list[str]: + """Strings `int()` maps to the same value as *digits*, spelled differently. + + These are exactly the spellings that make decode-only validation unsafe: + each names a *different* store key while decoding to the same coordinate. + """ + value = int(digits) + return [ + f"0{digits}", + f"00{digits}", + f"+{digits}", + f" {digits}", + f"{digits} ", + f"\t{digits}", + "".join(_ARABIC_INDIC[int(d)] for d in digits), + "".join(_FULLWIDTH[int(d)] for d in digits), + *([f"-{digits}"] if value == 0 else []), + ] + + +@st.composite +def non_canonical_chunk_keys(draw: st.DrawFn, array: Array[Any]) -> str: + """A chunk key that decodes into the grid but is not zarr's own spelling. + + Built by taking the canonical key and re-spelling one of its digit runs, + which keeps this strategy independent of the chunk key encoding's grammar. + """ + coords = draw(chunk_coords(array)) + canonical = array.metadata.encode_chunk_key(coords) + runs = list(re.finditer(r"\d+", canonical)) + assume(runs) + run = draw(st.sampled_from(runs)) + replacement = draw(st.sampled_from(_respellings(run.group()))) + key = canonical[: run.start()] + replacement + canonical[run.end() :] + assume(key != canonical) + return key + + +TRAVERSAL_KEYS = [ + # Percent-encoded on purpose. An HTTP client resolves dot-segments before + # it sends -- httpx turns "../secret" into "/secret" and ".." into "/" per + # RFC 3986 §5.2.4 -- so a literal "../" probe never reaches the server as + # traversal and asserts nothing. Encoded, it survives the client intact + # and Starlette decodes it back into a real ".." segment on arrival, which + # is the form the server's own guard has to catch. + "..%2Fsecret", + "%2e%2e%2Fsecret", + "%2e%2e%2F%2e%2e%2Fetc%2Fpasswd", + "%2e%2e", + "%2e", + "%2e%2Fzarr.json", + "a%2F..%2F..%2Fb", + "%2Fabsolute", + "sub%2F%2Fempty", + "C%3A%2Fwindows", + "..%5Cwindows", + "a%5C..%5C..%5Cb", + "%00nul", +] + + +def _chunk_payload(array: Array[Any]) -> bytes: + """Bytes of a full, uncompressed chunk for *array*.""" + return np.zeros(_CHUNKS, dtype=array.dtype).tobytes() + + +def _url(served: Served, array_relative_key: str) -> str: + """Request URL for a key, percent-encoded so it survives the wire verbatim. + + Generated keys contain characters a URL cannot carry literally -- a tab + makes httpx raise `InvalidURL`, and a space or a non-ASCII digit would be + re-encoded on the way out anyway. Encoding here means Starlette decodes + the path param back to exactly the key the strategy produced, so the + property really is "for any key K, a request for K is refused" rather than + "for any key the URL parser happened to leave alone". + """ + return f"{served.url}/{quote(served.path(array_relative_key), safe='/')}" + + +def _require_node_scope(served: Served) -> None: + """Skip a property that only a node-scoped app can satisfy. + + `store_app` proxies the store's raw key space and has no array semantics + to validate against, so every syntactically acceptable key is in-band for + it by contract -- including a non-canonical chunk spelling. Only + `node_app` claims to serve exactly one node's keys, so only `node_app` can + be held to what that set contains. + """ + if served.kind != "node": + pytest.skip("store_app serves the raw key space; node scoping does not apply") + + +class TestInBandRequests: + """Keys the node owns are served, and writes to them are visible.""" + + @given(data=st.data()) + @_HTTP + def test_get_of_a_canonical_key_returns_the_stored_bytes( + self, served: Served, data: st.DataObject + ) -> None: + """A GET of an in-band key returns exactly what the store holds, and + reading never changes the store.""" + coords = data.draw(chunk_coords(served.array)) + relative = served.array.metadata.encode_chunk_key(coords) + + before = _snapshot(served.store) + response = httpx.get(_url(served, relative), timeout=30) + + expected = before.get(served.store_key(relative)) + if expected is None: + assert response.status_code == 404 + else: + assert response.status_code == 200 + assert response.content == expected + assert _snapshot(served.store) == before + + @given(data=st.data()) + @_HTTP + def test_put_of_a_canonical_key_is_stored_and_readable( + self, served: Served, data: st.DataObject + ) -> None: + """The headline property: a PUT that reports success must be visible. + + Success means three things at once -- a 2xx, the bytes landing under + the key the client named, and a zarr client subsequently reading back + the values that were written. The original defect satisfied the first + and failed the other two. + """ + coords = data.draw(chunk_coords(served.array)) + fill = data.draw(st.integers(min_value=-(2**31), max_value=2**31 - 1)) + relative = served.array.metadata.encode_chunk_key(coords) + payload = np.full(_CHUNKS, fill, dtype=served.array.dtype).tobytes() + + before = _snapshot(served.store) + response = httpx.put(_url(served, relative), content=payload, timeout=30) + assert response.status_code == 204 + + after = _snapshot(served.store) + key = served.store_key(relative) + assert after[key] == payload, "the body did not land under the key the client named" + assert set(after) - set(before) <= {key}, "the write touched a key the client did not name" + + # The write is not merely present, it is legible: reopen the array and + # read the chunk the coordinates address. + reread = zarr.open_array(served.store, path="inside") + block = tuple(slice(c * s, (c + 1) * s) for c, s in zip(coords, _CHUNKS, strict=True)) + assert np.array_equal(reread[block], np.full(_CHUNKS, fill, dtype=served.array.dtype)) + + @given(data=st.data()) + @_HTTP + def test_range_of_a_stored_key_returns_the_matching_slice( + self, served: Served, data: st.DataObject + ) -> None: + """A satisfiable range returns exactly the bytes it names, and says so + in Content-Range.""" + relative = served.array.metadata.encode_chunk_key(tuple(0 for _ in _grid(served.array))) + key = served.store_key(relative) + before = _snapshot(served.store) + assume(key in before) + body = before[key] + + start = data.draw(st.integers(min_value=0, max_value=len(body) - 1)) + end = data.draw(st.integers(min_value=start, max_value=len(body) - 1)) + + response = httpx.get( + _url(served, relative), headers={"Range": f"bytes={start}-{end}"}, timeout=30 + ) + + assert response.status_code == 206 + assert response.content == body[start : end + 1] + # RFC 9110 §15.3.7: a single-part 206 must carry Content-Range, and it + # must describe the bytes actually returned. + content_range = response.headers["content-range"] + assert content_range.startswith(f"bytes {start}-{start + len(response.content) - 1}/") + assert _snapshot(served.store) == before + + @given(suffix=st.integers(min_value=1, max_value=200)) + @_HTTP + def test_suffix_range_returns_the_tail_and_locates_it( + self, served: Served, suffix: int + ) -> None: + """A suffix range must report where in the object its bytes came from. + + Zarr's sharding codec reads a shard index this way, so a 206 without + Content-Range leaves the reader unable to tell a clamped whole-object + read from the tail it asked for. + """ + relative = served.array.metadata.encode_chunk_key(tuple(0 for _ in _grid(served.array))) + key = served.store_key(relative) + before = _snapshot(served.store) + assume(key in before) + body = before[key] + + response = httpx.get( + _url(served, relative), headers={"Range": f"bytes=-{suffix}"}, timeout=30 + ) + + assert response.status_code == 206 + expected = body[-suffix:] if suffix <= len(body) else body + assert response.content == expected + first = len(body) - len(expected) + assert response.headers["content-range"].startswith(f"bytes {first}-{len(body) - 1}/") + assert _snapshot(served.store) == before + + +class TestOutOfBandRequests: + """Keys the node does not own are refused, and change nothing.""" + + @given(data=st.data()) + @_HTTP + def test_non_canonical_chunk_key_is_refused_and_writes_nothing( + self, served: Served, data: st.DataObject + ) -> None: + """The regression that motivated this module. + + A key that decodes into the grid but is spelled differently from + zarr's own rendering names a store key no reader consults. Accepting a + write to it reports success and loses the data, so it must be refused + and the store must be untouched. + """ + _require_node_scope(served) + relative = data.draw(non_canonical_chunk_keys(served.array)) + payload = _chunk_payload(served.array) + + before = _snapshot(served.store) + put = httpx.put(_url(served, relative), content=payload, timeout=30) + assert put.status_code == 404 + assert _snapshot(served.store) == before, "a refused write still modified the store" + + get = httpx.get(_url(served, relative), timeout=30) + assert get.status_code == 404 + assert _snapshot(served.store) == before + + @given(data=st.data()) + @_HTTP + def test_out_of_grid_chunk_key_is_refused_and_writes_nothing( + self, served: Served, data: st.DataObject + ) -> None: + """Coordinates past the end of the grid address no chunk of this array.""" + _require_node_scope(served) + coords = data.draw(out_of_grid_coords(served.array)) + relative = served.array.metadata.encode_chunk_key(coords) + + before = _snapshot(served.store) + put = httpx.put(_url(served, relative), content=_chunk_payload(served.array), timeout=30) + get = httpx.get(_url(served, relative), timeout=30) + + assert put.status_code == 404 + assert get.status_code == 404 + assert _snapshot(served.store) == before + + @given(key=st.sampled_from(TRAVERSAL_KEYS)) + @_HTTP + def test_traversal_key_is_refused_and_writes_nothing(self, served: Served, key: str) -> None: + """Nothing that tries to leave the served scope may be served or written.""" + before = _snapshot(served.store) + put = httpx.put(f"{served.url}/{key}", content=b"payload", timeout=30) + get = httpx.get(f"{served.url}/{key}", timeout=30) + + assert put.status_code in (403, 404, 405), f"{key!r} was accepted for writing" + assert get.status_code in (403, 404, 405), f"{key!r} was served" + assert _snapshot(served.store) == before + + @given(data=st.data()) + @_HTTP + def test_node_app_never_serves_a_sibling(self, served: Served, data: st.DataObject) -> None: + """A node_app is scoped to one node, so a sibling's keys are invisible + even though they exist in the same store.""" + if served.kind != "node": + pytest.skip("store_app deliberately serves the whole store") + + coords = data.draw(chunk_coords(served.array)) + chunk = served.array.metadata.encode_chunk_key(coords) + relative = data.draw( + st.sampled_from( + [ + f"outside/{chunk}", + "outside/zarr.json", + "outside/.zarray", + f"../outside/{chunk}", + ] + ) + ) + + before = _snapshot(served.store) + get = httpx.get(f"{served.url}/{relative}", timeout=30) + put = httpx.put(f"{served.url}/{relative}", content=b"payload", timeout=30) + + assert get.status_code == 404 + assert put.status_code == 404 + assert _snapshot(served.store) == before + + +class TestMethodsAndRanges: + """Transport-level invariants that hold for every key.""" + + @given( + method=st.sampled_from(["DELETE", "POST", "PATCH", "OPTIONS"]), + data=st.data(), + ) + @_HTTP + def test_unconfigured_method_is_refused_and_writes_nothing( + self, served: Served, method: str, data: st.DataObject + ) -> None: + """Only the methods the app was configured with may reach the store.""" + coords = data.draw(chunk_coords(served.array)) + relative = served.array.metadata.encode_chunk_key(coords) + + before = _snapshot(served.store) + response = httpx.request(method, _url(served, relative), content=b"payload", timeout=30) + + assert response.status_code == 405 + assert _snapshot(served.store) == before + + @given( + header=st.sampled_from( + [ + "bytes=abc-def", + "bytes=0-1,4-5", + "chars=0-7", + "bytes=", + "nonsense", + "bytes=+0-1", + ] + ) + ) + @_HTTP + def test_unusable_range_serves_the_whole_object(self, served: Served, header: str) -> None: + """RFC 9110 §14.2: a Range the server cannot use is ignored, not refused.""" + relative = served.array.metadata.encode_chunk_key(tuple(0 for _ in _grid(served.array))) + before = _snapshot(served.store) + key = served.store_key(relative) + assume(key in before) + + response = httpx.get(_url(served, relative), headers={"Range": header}, timeout=30) + + assert response.status_code == 200 + assert response.content == before[key] + assert "content-range" not in response.headers + + @given( + header=st.sampled_from( + [ + "bytes=5-2", + "bytes=-0", + "bytes=99999999999999999999-", + "bytes=100000-100001", + ] + ) + ) + @_HTTP + def test_unsatisfiable_range_is_refused(self, served: Served, header: str) -> None: + """A well-formed range that names nothing readable is a 416.""" + relative = served.array.metadata.encode_chunk_key(tuple(0 for _ in _grid(served.array))) + before = _snapshot(served.store) + assume(served.store_key(relative) in before) + + response = httpx.get(_url(served, relative), headers={"Range": header}, timeout=30) + + assert response.status_code == 416 + assert _snapshot(served.store) == before + + @given(end=st.integers(min_value=10**19, max_value=10**30)) + @_HTTP + def test_absurdly_wide_range_is_clamped_not_refused(self, served: Served, end: int) -> None: + """RFC 9110 §14.1.2 clamps a last-byte-pos past the end of the object, + so an over-wide range reads to EOF rather than erroring.""" + relative = served.array.metadata.encode_chunk_key(tuple(0 for _ in _grid(served.array))) + key = served.store_key(relative) + before = _snapshot(served.store) + assume(key in before) + + response = httpx.get( + _url(served, relative), headers={"Range": f"bytes=0-{end}"}, timeout=30 + ) + + assert response.status_code == 206 + assert response.content == before[key] + assert _snapshot(served.store) == before diff --git a/packages/zarr-http-server/tests/test_serve.py b/packages/zarr-http-server/tests/test_serve.py new file mode 100644 index 0000000000..8db6752ba1 --- /dev/null +++ b/packages/zarr-http-server/tests/test_serve.py @@ -0,0 +1,1831 @@ +from __future__ import annotations + +import asyncio +import errno +import os +import socket +from typing import TYPE_CHECKING, Any, Literal, get_args + +import numpy as np +import pytest +import zarr +from starlette.applications import Starlette +from starlette.routing import Mount +from starlette.testclient import TestClient +from zarr.buffer import cpu +from zarr.storage import LocalStore, MemoryStore + +from zarr_http_server._serve import ( + _SHUTDOWN_JOIN_MARGIN, + READ_ONLY_HTTP_METHODS, + READ_WRITE_HTTP_METHODS, + CorsOptions, + ReadOnlyHTTPMethod, + _bind_preferred_or_free, + _parse_range_header, + _RangeVerdict, + node_app, + serve_background, + store_app, +) + +if TYPE_CHECKING: + import pathlib + from collections.abc import Coroutine, Iterator + + from zarr.abc.store import Store + +ZarrFormat = Literal[2, 3] + +SHUTDOWN_TIMEOUT = 1 +"""shutdown_timeout used by the bounded-shutdown test.""" + +SLOW_HANDLER_SECONDS = 5 +"""How long that test's handler sleeps -- far longer than the shutdown bound, +so an unbounded join would be obvious.""" + + +def sync[T](coro: Coroutine[Any, Any, T]) -> T: + """Run a store coroutine to completion (tests use MemoryStore only).""" + return asyncio.run(coro) + + +@pytest.fixture +def group_with_arrays(store: Store) -> zarr.Group: + """Create a group containing a regular array and a sharded array.""" + root = zarr.open_group(store, mode="w") + zarr.create_array(root.store_path / "regular", shape=(4, 4), chunks=(2, 2), dtype="f8") + zarr.create_array( + root.store_path / "sharded", + shape=(8, 8), + chunks=(2, 2), + shards=(4, 4), + dtype="i4", + ) + return root + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestNodeAppDoesNotExposeNonZarrKeys: + """node_app must never expose keys that are not part of the zarr hierarchy.""" + + def test_non_zarr_key_returns_404(self, store: Store, group_with_arrays: zarr.Group) -> None: + """A key that is not valid zarr metadata or a valid chunk key should return 404, + even if the underlying store contains data at that path.""" + non_zarr_buf = cpu.buffer_prototype.buffer.from_bytes(b"secret data") + sync(store.set("secret.txt", non_zarr_buf)) + + app = node_app(group_with_arrays) + client = TestClient(app) + + # The non-zarr key must not be accessible. + response = client.get("/secret.txt") + assert response.status_code == 404 + + def test_non_zarr_key_nested_returns_404( + self, store: Store, group_with_arrays: zarr.Group + ) -> None: + """A non-zarr key nested under a real array's path should return 404, + even though the path prefix matches a valid zarr node.""" + non_zarr_buf = cpu.buffer_prototype.buffer.from_bytes(b"not a chunk") + sync(store.set("regular/notes.txt", non_zarr_buf)) + + app = node_app(group_with_arrays) + client = TestClient(app) + + response = client.get("/regular/notes.txt") + assert response.status_code == 404 + + def test_valid_metadata_is_accessible(self, group_with_arrays: zarr.Group) -> None: + """Zarr metadata keys (zarr.json) for both the root group and child arrays + should be served with a 200 status.""" + app = node_app(group_with_arrays) + client = TestClient(app) + + # Root group metadata + response = client.get("/zarr.json") + assert response.status_code == 200 + + # Array metadata + response = client.get("/regular/zarr.json") + assert response.status_code == 200 + + def test_valid_chunk_is_accessible(self, group_with_arrays: zarr.Group) -> None: + """A valid, in-bounds chunk key for an array with written data should + be served with a 200 status.""" + arr = group_with_arrays["regular"] + assert isinstance(arr, zarr.Array) + arr[:] = np.ones((4, 4)) + + app = node_app(group_with_arrays) + client = TestClient(app) + + # c/0/0 is a valid chunk key for a (4,4) array with (2,2) chunks. + response = client.get("/regular/c/0/0") + assert response.status_code == 200 + + def test_out_of_bounds_chunk_key_returns_404( + self, store: Store, group_with_arrays: zarr.Group + ) -> None: + """A chunk key that is syntactically valid but references indices beyond + the array's chunk grid should return 404.""" + arr = group_with_arrays["regular"] + assert isinstance(arr, zarr.Array) + arr[:] = np.ones((4, 4)) + + # Put real data at the out-of-grid key, so that a 404 can only come + # from the bounds check -- not from the key merely being absent. + planted = cpu.buffer_prototype.buffer.from_bytes(b"out of grid") + sync(store.set("regular/c/99/99", planted)) + assert sync(store.get("regular/c/99/99", cpu.buffer_prototype)) is not None + + app = node_app(group_with_arrays) + client = TestClient(app) + + # (4,4) array with (2,2) chunks has grid shape (2,2), so c/99/99 is + # syntactically valid but out of bounds. + response = client.get("/regular/c/99/99") + assert response.status_code == 404 + + def test_empty_path_returns_404(self, group_with_arrays: zarr.Group) -> None: + """A request to the root path '/' should return 404 because an empty + string is not a valid zarr key.""" + app = node_app(group_with_arrays) + client = TestClient(app) + + response = client.get("/") + assert response.status_code == 404 + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestShardedArrayByteRangeReads: + """Byte-range reads against a sharded array served via node_app.""" + + def test_range_read_returns_206(self, group_with_arrays: zarr.Group) -> None: + """A Range header requesting a specific byte range (e.g. bytes=0-7) should + return 206 Partial Content with exactly those bytes.""" + arr = group_with_arrays["sharded"] + assert isinstance(arr, zarr.Array) + arr[:] = np.arange(64, dtype="i4").reshape((8, 8)) + + app = node_app(group_with_arrays) + client = TestClient(app) + + # c/0/0 is the first shard key for an (8,8) array with (4,4) shards. + full_response = client.get("/sharded/c/0/0") + assert full_response.status_code == 200 + full_body = full_response.content + + # Request the first 8 bytes. + range_response = client.get("/sharded/c/0/0", headers={"Range": "bytes=0-7"}) + assert range_response.status_code == 206 + assert range_response.content == full_body[:8] + + def test_suffix_range_read(self, group_with_arrays: zarr.Group) -> None: + """A suffix byte range (e.g. bytes=-4) should return the last N bytes + of the resource with a 206 status.""" + arr = group_with_arrays["sharded"] + assert isinstance(arr, zarr.Array) + arr[:] = np.arange(64, dtype="i4").reshape((8, 8)) + + app = node_app(group_with_arrays) + client = TestClient(app) + + full_response = client.get("/sharded/c/0/0") + full_body = full_response.content + + # Request the last 4 bytes. + range_response = client.get("/sharded/c/0/0", headers={"Range": "bytes=-4"}) + assert range_response.status_code == 206 + assert range_response.content == full_body[-4:] + + def test_offset_range_read(self, group_with_arrays: zarr.Group) -> None: + """An offset byte range (e.g. bytes=4-) should return all bytes from + the given offset to the end, with a 206 status.""" + arr = group_with_arrays["sharded"] + assert isinstance(arr, zarr.Array) + arr[:] = np.arange(64, dtype="i4").reshape((8, 8)) + + app = node_app(group_with_arrays) + client = TestClient(app) + + full_response = client.get("/sharded/c/0/0") + full_body = full_response.content + + # Request everything from byte 4 onward. + range_response = client.get("/sharded/c/0/0", headers={"Range": "bytes=4-"}) + assert range_response.status_code == 206 + assert range_response.content == full_body[4:] + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestUnusableRangeHeadersAreIgnored: + """A Range this server cannot turn into a read is ignored, not refused. + + RFC 9110 §14.2 requires ignoring a Range whose unit is unrecognized and + permits ignoring one that will not parse; either way the answer is 200 + with the full representation. Refusing with 416 would tell a client the + object is unreadable when only the request shape was unsupported -- and + a multi-range request, which is legal to send and which proxies and + download accelerators do send, would take that at face value. + """ + + @pytest.mark.parametrize( + "header", + [ + "bytes=abc-def", + "bytes=-abc", + "bytes=abc-", + "bytes=0-7,10-20", + "chars=0-7", + "bytes=", + "bytes=+0-1", + ], + ) + def test_unusable_range_serves_full_representation(self, store: Store, header: str) -> None: + """Non-numeric bounds, multi-range, a non-'bytes' unit, an empty spec + and a non-canonical byte position all fall back to a plain 200.""" + body = b"some data here" + sync(store.set("key", cpu.buffer_prototype.buffer.from_bytes(body))) + + client = TestClient(store_app(store), raise_server_exceptions=False) + + response = client.get("/key", headers={"Range": header}) + assert response.status_code == 200 + assert response.content == body + assert "content-range" not in response.headers + + +class TestParseRangeHeader: + """Unit tests for _parse_range_header.""" + + def test_parser_rejects_an_inverted_range(self) -> None: + """Pin the parser itself: on a MemoryStore an unguarded inverted range + happens to return b"" and still yields 416, so the status code alone + cannot tell whether the guard is present.""" + assert _parse_range_header("bytes=5-2") is _RangeVerdict.UNSATISFIABLE + assert _parse_range_header("bytes=0-0") is not _RangeVerdict.UNSATISFIABLE + + def test_valid_range(self) -> None: + """'bytes=0-99' should parse into a RangeByteRequest with start=0 and + end=100 (end is exclusive, so the inclusive HTTP end is incremented).""" + from zarr.abc.store import RangeByteRequest + + result = _parse_range_header("bytes=0-99") + assert result == RangeByteRequest(start=0, end=100) + + def test_valid_suffix(self) -> None: + """'bytes=-50' should parse into a SuffixByteRequest requesting the + last 50 bytes of the resource.""" + from zarr.abc.store import SuffixByteRequest + + result = _parse_range_header("bytes=-50") + assert result == SuffixByteRequest(suffix=50) + + def test_valid_offset(self) -> None: + """'bytes=10-' should parse into an OffsetByteRequest starting at + byte 10 and reading to the end of the resource.""" + from zarr.abc.store import OffsetByteRequest + + result = _parse_range_header("bytes=10-") + assert result == OffsetByteRequest(offset=10) + + def test_non_bytes_unit(self) -> None: + """An unrecognized range unit must be ignored, per RFC 9110 §14.2.""" + assert _parse_range_header("chars=0-7") is _RangeVerdict.IGNORE + + def test_garbage_values(self) -> None: + """Non-numeric bounds are ignored rather than raising a ValueError.""" + assert _parse_range_header("bytes=abc-def") is _RangeVerdict.IGNORE + + def test_multi_range(self) -> None: + """Multi-range requests (e.g. bytes=0-7,10-20) are legal to send; this + server does not build multipart/byteranges, so it serves the whole + representation instead of refusing.""" + assert _parse_range_header("bytes=0-7,10-20") is _RangeVerdict.IGNORE + + def test_empty_spec(self) -> None: + """A Range header with no range specifier after 'bytes=' is ignored.""" + assert _parse_range_header("bytes=") is _RangeVerdict.IGNORE + + def test_non_canonical_byte_position(self) -> None: + """`int` would accept these; RFC 9110 defines a byte position as + 1*DIGIT, so they are not ranges and the header is ignored.""" + assert _parse_range_header("bytes=+0-1") is _RangeVerdict.IGNORE + assert _parse_range_header("bytes= 0-1") is _RangeVerdict.IGNORE + assert _parse_range_header("bytes=0_0-1") is _RangeVerdict.IGNORE + + def test_oversized_start_is_unsatisfiable(self) -> None: + """A first-byte-pos past any possible object names nothing.""" + assert _parse_range_header("bytes=99999999999999999999-") is _RangeVerdict.UNSATISFIABLE + + def test_zero_length_suffix_is_unsatisfiable(self) -> None: + """ "The last zero bytes" names nothing.""" + assert _parse_range_header("bytes=-0") is _RangeVerdict.UNSATISFIABLE + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestWriteViaPut: + """store_app and node_app can be configured to accept PUT writes.""" + + def test_put_writes_to_store(self, store: Store) -> None: + """A PUT request to store_app with PUT enabled should write the + request body into the store at the given key.""" + app = store_app(store, methods={"GET", "PUT"}) + client = TestClient(app) + + payload = b"hello zarr" + response = client.put("/some/key", content=payload) + assert response.status_code == 204 + + # Verify the data landed in the store. + buf = sync(store.get("some/key", cpu.buffer_prototype)) + assert buf is not None + assert buf.to_bytes() == payload + + def test_put_then_get_roundtrip(self, store: Store) -> None: + """Data written via PUT should be retrievable via a subsequent GET + at the same key.""" + app = store_app(store, methods={"GET", "PUT"}) + client = TestClient(app) + + payload = b"\x00\x01\x02\x03" + client.put("/data/blob", content=payload) + + response = client.get("/data/blob") + assert response.status_code == 200 + assert response.content == payload + + def test_put_rejected_when_not_configured(self, store: Store) -> None: + """PUT requests should return 405 Method Not Allowed when the server + is created with the default methods (GET only).""" + app = store_app(store) + client = TestClient(app) + + response = client.put("/some/key", content=b"data") + assert response.status_code == 405 + + def test_put_on_node_validates_key(self, store: Store, group_with_arrays: zarr.Group) -> None: + """PUT requests via node_app should be rejected with 404 when the + target key is not a valid zarr key (metadata or chunk).""" + app = node_app(group_with_arrays, methods={"GET", "PUT"}) + client = TestClient(app) + + response = client.put("/not_a_zarr_key.bin", content=b"data") + assert response.status_code == 404 + + def test_put_to_valid_chunk_key_succeeds(self, group_with_arrays: zarr.Group) -> None: + """PUT requests via node_app to a valid chunk key should succeed + with 204, and the written data should be retrievable via GET.""" + app = node_app(group_with_arrays, methods={"GET", "PUT"}) + client = TestClient(app) + + payload = b"\x00" * 32 + response = client.put("/regular/c/0/0", content=payload) + assert response.status_code == 204 + + # Confirm it round-trips. + get_response = client.get("/regular/c/0/0") + assert get_response.status_code == 200 + assert get_response.content == payload + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestMethodValidation: + """Only the methods the handler implements may be served.""" + + def test_supported_methods_are_served(self, store: Store) -> None: + """GET, PUT and HEAD each behave as their verb implies.""" + app = store_app(store, methods={"GET", "PUT", "HEAD"}) + client = TestClient(app) + + assert client.put("/zarr.json", content=b'{"a":1}').status_code == 204 + assert client.get("/zarr.json").content == b'{"a":1}' + + # HEAD reports the same status as GET but carries no body. + head = client.head("/zarr.json") + assert head.status_code == 200 + assert head.content == b"" + + def test_empty_method_set_raises(self, store: Store) -> None: + """Asking for no methods must be rejected rather than producing a + server that answers every verb, including writes: Starlette treats a + falsy `methods` on a Route as "match anything".""" + for build in ( + lambda: store_app(store, methods=set()), + lambda: node_app(zarr.open_group(store, mode="a"), methods=set()), + ): + with pytest.raises(ValueError, match="at least one"): + build() + + @pytest.mark.parametrize("method", ["DELETE", "POST", "PATCH", "OPTIONS", "TRACE"]) + def test_unsupported_method_raises(self, store: Store, method: str) -> None: + """A verb the handler cannot implement is rejected when the app is + built, rather than silently answering as if it were a GET.""" + for build in ( + lambda: store_app(store, methods={"GET", method}), # type: ignore[arg-type] + lambda: node_app(zarr.open_group(store, mode="a"), methods={"GET", method}), # type: ignore[arg-type] + ): + with pytest.raises(ValueError, match=method): + build() + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestStoreAppEdgeCases: + """Edge cases for store_app.""" + + def test_get_nonexistent_key_returns_404(self, store: Store) -> None: + """GET for a key that does not exist in the store should return 404.""" + app = store_app(store) + client = TestClient(app) + + response = client.get("/no/such/key") + assert response.status_code == 404 + + def test_empty_path_returns_404(self, store: Store) -> None: + """GET to the root path '/' (empty key) should return 404 because + an empty string is not a valid store key.""" + app = store_app(store) + client = TestClient(app) + + response = client.get("/") + assert response.status_code == 404 + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestNodeAppDirectArray: + """Serve a single array directly (not through a group).""" + + def test_serve_nested_array_directly(self, store: Store) -> None: + """When node_app is given a nested array (not a group), requests + should use keys relative to that array's path. Metadata and in-bounds + chunks should return 200, and out-of-bounds chunks should return 404.""" + root = zarr.open_group(store, mode="w") + arr = zarr.create_array( + root.store_path / "sub/nested", + shape=(4,), + chunks=(2,), + dtype="f8", + ) + arr[:] = np.arange(4, dtype="f8") + + # Serve the array directly — its prefix is "sub/nested". + app = node_app(arr) + client = TestClient(app) + + # Metadata should be accessible at the array root. + response = client.get("/zarr.json") + assert response.status_code == 200 + + # Chunk keys are relative to the array. + response = client.get("/c/0") + assert response.status_code == 200 + + response = client.get("/c/1") + assert response.status_code == 200 + + # Out of bounds. + response = client.get("/c/99") + assert response.status_code == 404 + + def test_serve_root_array(self, store: Store) -> None: + """When node_app is given an array stored at the root of a store + (empty prefix), metadata and chunk keys should be accessible at + their natural paths.""" + arr = zarr.create_array( + store, + shape=(6,), + chunks=(3,), + dtype="i4", + ) + arr[:] = np.arange(6, dtype="i4") + + # Root-level array has prefix = "". + app = node_app(arr) + client = TestClient(app) + + response = client.get("/zarr.json") + assert response.status_code == 200 + + response = client.get("/c/0") + assert response.status_code == 200 + + response = client.get("/c/1") + assert response.status_code == 200 + + response = client.get("/c/2") + assert response.status_code == 404 + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestContentType: + """Responses should have the correct Content-Type.""" + + def test_metadata_has_json_content_type(self, group_with_arrays: zarr.Group) -> None: + """Zarr metadata files (zarr.json) should be served with + Content-Type: application/json.""" + app = node_app(group_with_arrays) + client = TestClient(app) + + response = client.get("/zarr.json") + assert response.status_code == 200 + assert response.headers["content-type"] == "application/json" + + def test_chunk_has_octet_stream_content_type(self, group_with_arrays: zarr.Group) -> None: + """Chunk data should be served with Content-Type: application/octet-stream + since it is binary data.""" + arr = group_with_arrays["regular"] + assert isinstance(arr, zarr.Array) + arr[:] = np.ones((4, 4)) + + app = node_app(group_with_arrays) + client = TestClient(app) + + response = client.get("/regular/c/0/0") + assert response.status_code == 200 + assert response.headers["content-type"] == "application/octet-stream" + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestCorsMiddleware: + """CORS middleware should add the expected headers.""" + + def test_cors_headers_present(self, store: Store) -> None: + """When cors_options are provided, responses should include the + Access-Control-Allow-Origin header matching the request origin.""" + buf = cpu.buffer_prototype.buffer.from_bytes(b"data") + sync(store.set("key", buf)) + + cors = CorsOptions(allow_origins=["https://example.com"], allow_methods=["GET"]) + app = store_app(store, cors_options=cors) + client = TestClient(app) + + response = client.get("/key", headers={"Origin": "https://example.com"}) + assert response.status_code == 200 + assert response.headers["access-control-allow-origin"] == "https://example.com" + + def test_cors_preflight(self, store: Store) -> None: + """CORS preflight OPTIONS requests should return 200 with the + Access-Control-Allow-Origin header when CORS is configured.""" + cors = CorsOptions(allow_origins=["*"], allow_methods=["GET", "PUT"]) + app = store_app(store, methods={"GET", "PUT"}, cors_options=cors) + client = TestClient(app) + + response = client.options( + "/any/path", + headers={ + "Origin": "https://example.com", + "Access-Control-Request-Method": "PUT", + }, + ) + assert response.status_code == 200 + assert "access-control-allow-origin" in response.headers + + def test_no_cors_headers_without_option(self, store: Store) -> None: + """When no cors_options are provided, responses should not include + any CORS headers, even if the request includes an Origin header.""" + buf = cpu.buffer_prototype.buffer.from_bytes(b"data") + sync(store.set("key", buf)) + + app = store_app(store) + client = TestClient(app) + + response = client.get("/key", headers={"Origin": "https://example.com"}) + assert response.status_code == 200 + assert "access-control-allow-origin" not in response.headers + + +def _metadata_key(zarr_format: ZarrFormat) -> str: + """Return the metadata key for the given zarr format.""" + return "zarr.json" if zarr_format == 3 else ".zarray" + + +def _chunk_key(zarr_format: ZarrFormat, coords: str) -> str: + """Return a chunk key for the given format. + + *coords* is a dot-separated string like ``"0.0"``. For v3 this becomes + ``"c/0/0"``; for v2 it is returned unchanged. + """ + if zarr_format == 3: + return "c/" + coords.replace(".", "/") + return coords + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestNodeAppV2AndV3: + """Test node_app with both v2 and v3 arrays side by side.""" + + def test_metadata_accessible(self, store: Store, zarr_format: ZarrFormat) -> None: + """The format-appropriate metadata key should be served with 200.""" + arr = zarr.create_array(store, shape=(4,), chunks=(2,), dtype="f8", zarr_format=zarr_format) + app = node_app(arr) + client = TestClient(app) + + response = client.get(f"/{_metadata_key(zarr_format)}") + assert response.status_code == 200 + + def test_chunk_accessible(self, store: Store, zarr_format: ZarrFormat) -> None: + """An in-bounds chunk key should be served with 200 for both formats.""" + arr = zarr.create_array(store, shape=(4,), chunks=(2,), dtype="f8", zarr_format=zarr_format) + arr[:] = np.ones(4) + + app = node_app(arr) + client = TestClient(app) + + response = client.get(f"/{_chunk_key(zarr_format, '0')}") + assert response.status_code == 200 + + def test_out_of_bounds_chunk_returns_404(self, store: Store, zarr_format: ZarrFormat) -> None: + """An out-of-bounds chunk key should return 404 for both formats.""" + arr = zarr.create_array(store, shape=(4,), chunks=(2,), dtype="f8", zarr_format=zarr_format) + arr[:] = np.ones(4) + + # Plant data at the out-of-grid key so the 404 must come from the + # bounds check rather than from the key being absent. + key = _chunk_key(zarr_format, "99") + sync(store.set(key, cpu.buffer_prototype.buffer.from_bytes(b"out of grid"))) + assert sync(store.get(key, cpu.buffer_prototype)) is not None + + app = node_app(arr) + client = TestClient(app) + + response = client.get(f"/{key}") + assert response.status_code == 404 + + def test_non_zarr_key_returns_404(self, store: Store, zarr_format: ZarrFormat) -> None: + """A non-zarr key should return 404 regardless of format.""" + arr = zarr.create_array(store, shape=(4,), chunks=(2,), dtype="f8", zarr_format=zarr_format) + non_zarr_buf = cpu.buffer_prototype.buffer.from_bytes(b"secret") + sync(store.set("secret.txt", non_zarr_buf)) + + app = node_app(arr) + client = TestClient(app) + + response = client.get("/secret.txt") + assert response.status_code == 404 + + def test_data_roundtrip(self, store: Store, zarr_format: ZarrFormat) -> None: + """Data written to an array should be readable via store_app for + both formats.""" + arr = zarr.create_array(store, shape=(4,), chunks=(2,), dtype="f8", zarr_format=zarr_format) + arr[:] = np.arange(4, dtype="f8") + + app = store_app(store) + client = TestClient(app) + + # Metadata should be accessible. + response = client.get(f"/{_metadata_key(zarr_format)}") + assert response.status_code == 200 + + # First chunk should be accessible. + response = client.get(f"/{_chunk_key(zarr_format, '0')}") + assert response.status_code == 200 + assert len(response.content) > 0 + + +class TestPathTraversalProtection: + """store_app and node_app must reject path-traversal attempts before + touching the store, regardless of URL-encoding tricks.""" + + def test_get_traversal_outside_store_root_returns_404(self, tmp_path: Any) -> None: + """A GET for a percent-encoded '../secret.txt' must not escape the + store root and read a file outside it.""" + from zarr.storage import LocalStore + + root = tmp_path / "store_root" + root.mkdir() + secret = tmp_path / "secret.txt" + secret.write_text("top secret contents") + + store = LocalStore(root) + app = store_app(store, methods={"GET", "PUT"}) + client = TestClient(app) + + response = client.get("/..%2fsecret.txt") + assert response.status_code == 404 + assert b"top secret" not in response.content + + def test_put_traversal_outside_store_root_returns_404(self, tmp_path: Any) -> None: + """A PUT to a percent-encoded '../pwned.txt' must not escape the + store root and write a file outside it.""" + from zarr.storage import LocalStore + + root = tmp_path / "store_root" + root.mkdir() + pwned = tmp_path / "pwned.txt" + + store = LocalStore(root) + app = store_app(store, methods={"GET", "PUT"}) + client = TestClient(app) + + response = client.put("/..%2fpwned.txt", content=b"pwned") + assert response.status_code == 404 + assert not pwned.exists() + + @pytest.mark.parametrize( + ("encoded_path", "climb_depth"), + [ + ("/..%2fsecret.txt", 1), + ("/%2e%2e/secret.txt", 1), + ("/..%2f..%2fsecret.txt", 2), + ], + ) + def test_encoded_traversal_variants_return_404( + self, tmp_path: Any, encoded_path: str, climb_depth: int + ) -> None: + """Various percent-encoded traversal spellings must all be rejected. + + The store root is nested exactly ``climb_depth`` directories below + ``tmp_path`` and the secret lives at ``tmp_path/secret.txt`` -- the + exact location each traversal's ".." segments resolve to -- so a + case with a missing or deleted guard would actually reach the + secret instead of just returning 404 for an unrelated reason (e.g. + a two-level climb landing on a directory that happens to be empty). + """ + from zarr.storage import LocalStore + + parts = [f"level{i}" for i in range(climb_depth - 1)] + ["store_root"] + root = tmp_path.joinpath(*parts) + root.mkdir(parents=True) + secret = tmp_path / "secret.txt" + secret.write_text("top secret contents") + + store = LocalStore(root) + app = store_app(store, methods={"GET", "PUT"}) + client = TestClient(app) + + response = client.get(encoded_path) + assert response.status_code == 404 + assert b"top secret" not in response.content + + def test_get_absolute_key_bypass_returns_404(self, tmp_path: Any) -> None: + """A percent-encoded leading slash decodes to an ABSOLUTE path param + (e.g. request '/%2fetc%2fhostname' -> path param '/etc/hostname'). + '/etc/hostname'.split('/') -> ['', 'etc', 'hostname'] has no '.' or + '..' segment, so the two-element guard misses it, but LocalStore + resolves an absolute key by discarding its root entirely -- an + arbitrary-file read. The empty leading segment must be rejected.""" + from zarr.storage import LocalStore + + root = tmp_path / "store_root" + root.mkdir() + secret = tmp_path / "secret_abs.txt" + secret.write_text("top secret absolute contents") + + store = LocalStore(root) + app = store_app(store, methods={"GET", "PUT"}) + client = TestClient(app) + + # Mirror the exploit: percent-encode every "/" (including the + # leading one) in the absolute secret path as "%2f". + encoded_path = "/" + str(secret).replace("/", "%2f") + + response = client.get(encoded_path) + assert response.status_code == 404 + assert b"top secret absolute" not in response.content + assert secret.read_text() == "top secret absolute contents" + + def test_put_absolute_key_bypass_returns_404(self, tmp_path: Any) -> None: + """Same absolute-key vector as above, but for PUT: a percent-encoded + leading slash must not allow writing a file outside the store root.""" + from zarr.storage import LocalStore + + root = tmp_path / "store_root" + root.mkdir() + pwned = tmp_path / "pwned_abs.txt" + + store = LocalStore(root) + app = store_app(store, methods={"GET", "PUT"}) + client = TestClient(app) + + encoded_path = "/" + str(pwned).replace("/", "%2f") + + response = client.put(encoded_path, content=b"pwned") + assert response.status_code == 404 + assert not pwned.exists() + + @pytest.mark.parametrize( + "encoded_path", + [ + "/..%5C..%5Cwin.ini", + "/%5CWindows%5Cwin.ini", + "/C:/Windows/win.ini", + "/C:%5CWindows", + "/%5C%5Chost%5Cshare%5Cx", + ], + ) + def test_backslash_and_drive_traversal_variants_return_404(self, encoded_path: str) -> None: + """Backslash is a path separator on Windows, and a drive-qualified or + root-relative key discards a filesystem store's root entirely on + Windows, even though POSIX only ever treats '/' as a separator. The + guard must reject these purely from the string, before the store is + ever touched -- verified here by making the store raise if called.""" + from unittest.mock import AsyncMock + + from zarr.storage import MemoryStore + + store = MemoryStore() + store.get = AsyncMock(side_effect=AssertionError("store.get should not be called")) # type: ignore[method-assign] + store.set = AsyncMock(side_effect=AssertionError("store.set should not be called")) # type: ignore[method-assign] + + app = store_app(store, methods={"GET", "PUT"}) + client = TestClient(app) + + response = client.get(encoded_path) + assert response.status_code == 404 + + def test_put_backslash_traversal_returns_404(self) -> None: + """A PUT to a backslash-encoded '..\\..\\pwned.txt' must be rejected + before the store is touched, mirroring the GET case above.""" + from unittest.mock import AsyncMock + + from zarr.storage import MemoryStore + + store = MemoryStore() + store.set = AsyncMock(side_effect=AssertionError("store.set should not be called")) # type: ignore[method-assign] + + app = store_app(store, methods={"GET", "PUT"}) + client = TestClient(app) + + response = client.put("/..%5C..%5Cpwned.txt", content=b"pwned") + assert response.status_code == 404 + + +def _get_free_port() -> int: + """Return an unused TCP port on localhost.""" + import socket + + with socket.socket() as s: + s.bind(("127.0.0.1", 0)) + port: int = s.getsockname()[1] + return port + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestServeBackground: + """Test serve_background with store- and node-scoped apps.""" + + def test_background_server_over_a_store_app(self, store: Store) -> None: + """serve_background over a store app should return a BackgroundServer + that responds to HTTP requests and can be used as a context manager.""" + import httpx + + from zarr_http_server import serve_background + + buf = cpu.buffer_prototype.buffer.from_bytes(b"hello") + sync(store.set("key", buf)) + + port = _get_free_port() + with serve_background(store_app(store), host="127.0.0.1", port=port) as server: + assert server.host == "127.0.0.1" + assert server.port == port + assert server.url == f"http://127.0.0.1:{port}" + + response = httpx.get(f"{server.url}/key") + assert response.status_code == 200 + assert response.content == b"hello" + + def test_background_server_over_a_node_app(self, store: Store) -> None: + """serve_background over a node app should return a BackgroundServer + that responds to HTTP requests and can be used as a context manager.""" + import httpx + + from zarr_http_server import serve_background + + arr = zarr.create_array(store, shape=(4,), chunks=(2,), dtype="f8") + arr[:] = np.arange(4, dtype="f8") + + port = _get_free_port() + with serve_background(node_app(arr), host="127.0.0.1", port=port) as server: + response = httpx.get(f"{server.url}/zarr.json") + assert response.status_code == 200 + + +class TestStoreFailuresAreNotReportedAsMisses: + """Under the v3 spec an absent chunk is an uninitialized one, and a reader + is right to substitute the array's fill value for it. A 404 therefore + asserts something about the store's contents, and an I/O failure must not + borrow it -- that would have a correct client materialize fill values over + data that exists.""" + + @pytest.mark.skipif(os.geteuid() == 0, reason="root bypasses the permission bits under test") + def test_unreadable_key_is_a_server_error(self, tmp_path: pathlib.Path) -> None: + root = tmp_path / "root" + root.mkdir() + (root / "key").write_bytes(b"real data") + os.chmod(root / "key", 0o000) + + client = TestClient(store_app(LocalStore(str(root))), raise_server_exceptions=False) + try: + assert client.get("/key").status_code >= 500 + finally: + os.chmod(root / "key", 0o600) + + @pytest.mark.skipif(os.geteuid() == 0, reason="root bypasses the permission bits under test") + def test_unwritable_store_is_a_server_error(self, tmp_path: pathlib.Path) -> None: + root = tmp_path / "ro" + root.mkdir() + os.chmod(root, 0o500) + + client = TestClient( + store_app(LocalStore(str(root)), methods={"GET", "PUT"}), + raise_server_exceptions=False, + ) + try: + assert client.put("/key", content=b"data").status_code >= 500 + finally: + os.chmod(root, 0o700) + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestShardGridBounds: + """A sharded array's storage grid is its shard grid, not its chunk grid.""" + + def test_out_of_shard_grid_key_returns_404(self, store: Store) -> None: + arr = zarr.create_array(store, shape=(8, 8), chunks=(2, 2), shards=(4, 4), dtype="i4") + arr[:] = np.arange(64, dtype="i4").reshape(8, 8) + + # (8,8) with (4,4) shards has a 2x2 shard grid, so c/3/3 is out of it. + # Plant data there so the 404 must come from the bounds check. + sync(store.set("c/3/3", cpu.buffer_prototype.buffer.from_bytes(b"PLANTED"))) + assert sync(store.get("c/3/3", cpu.buffer_prototype)) is not None + + client = TestClient(node_app(arr)) + assert client.get("/c/0/0").status_code == 200 + assert client.get("/c/3/3").status_code == 404 + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestWrongArityChunkKeys: + """A chunk key with the wrong number of coordinates is invalid, and must + not reach the grid comparison -- zip(strict=True) would raise there.""" + + @pytest.mark.parametrize("key", ["c/0", "c/0/0/0", "c/0/0/0/0"]) + def test_wrong_arity_returns_404(self, store: Store, key: str) -> None: + arr = zarr.create_array(store, shape=(4, 4), chunks=(2, 2), dtype="f8") + arr[:] = np.ones((4, 4)) + + sync(store.set(key, cpu.buffer_prototype.buffer.from_bytes(b"PLANTED"))) + + client = TestClient(node_app(arr), raise_server_exceptions=False) + assert client.get(f"/{key}").status_code == 404 + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestNodeNamesContainingAColon: + """A leading `:` is a drive reference to `ntpath`, so the guard rejects + it on every platform to keep it a pure string gate in front of any store. + The documented cost is that such a name is unreachable in the first + segment -- but only there.""" + + def test_colon_named_node_in_a_later_segment_is_served(self, store: Store) -> None: + root = zarr.open_group(store, mode="w") + sub = root.create_group("sub") + sub.create_array("a:b", shape=(2,), chunks=(2,), dtype="f8") + + client = TestClient(node_app(root)) + assert client.get("/sub/a:b/zarr.json").status_code == 200 + + def test_colon_named_node_in_the_first_segment_is_rejected(self, store: Store) -> None: + root = zarr.open_group(store, mode="w") + root.create_array("a:b", shape=(2,), chunks=(2,), dtype="f8") + + client = TestClient(node_app(root)) + assert client.get("/a:b/zarr.json").status_code == 404 + + +class TestChunkedBodyIsCapped: + """A chunked request carries no Content-Length, so the cap has to hold + while the body is being read rather than after it is buffered.""" + + def test_chunked_body_over_cap_is_rejected(self, tmp_path: pathlib.Path) -> None: + store = LocalStore(str(tmp_path / "root")) + client = TestClient( + store_app(store, methods={"GET", "PUT"}, max_body_size=64), + raise_server_exceptions=False, + ) + + def body() -> Iterator[bytes]: + for _ in range(20): + yield b"x" * 32 + + # httpx sends an iterator body with Transfer-Encoding: chunked. + assert client.put("/key", content=body()).status_code == 413 + assert not (tmp_path / "root" / "key").exists() + + +class TestHostileKeysAreNotServerErrors: + """A key the store cannot express is a miss, not a server fault: the + server must never answer 5xx for input a client can choose freely. + + This needs a filesystem-backed store -- a `MemoryStore` accepts any key + as a dict key, so only `LocalStore` surfaces the underlying errors (an + embedded NUL, a name longer than the filesystem allows). + """ + + @pytest.mark.parametrize( + "path", ["/x%00y", "/ok.txt%00", "/" + "a" * 3000, "/" + "b" * 3000 + "/zarr.json"] + ) + def test_unexpressable_key_returns_404_not_500(self, tmp_path: pathlib.Path, path: str) -> None: + store = LocalStore(str(tmp_path / "root")) + client = TestClient(store_app(store, methods={"GET", "PUT"})) + + assert client.get(path).status_code == 404 + assert client.put(path, content=b"x").status_code == 404 + + +class TestGenericStoreFailuresAreNotMisses: + """Only an error that answers about the *name* may become a 404. + + `ENAMETOOLONG` says no such name is expressible, which is an answer about + the key. `EINVAL` is POSIX's catch-all and is reachable on a perfectly + ordinary short key -- a bad seek, an unsupported filesystem feature -- so + reporting it as absence would have a v3 reader write fill values over a + chunk that exists but could not be read. + """ + + @staticmethod + def _store_failing_with(code: int) -> Store: + class Failing(MemoryStore): + async def get(self, key: str, prototype: Any, byte_range: Any = None) -> Any: + raise OSError(code, os.strerror(code)) + + async def set(self, key: str, value: Any) -> None: + raise OSError(code, os.strerror(code)) + + return Failing() + + def test_einval_is_not_reported_as_absent(self) -> None: + """The regression this class exists for.""" + client = TestClient( + store_app(self._store_failing_with(errno.EINVAL), methods={"GET", "PUT"}), + raise_server_exceptions=False, + ) + + assert client.get("/c/0/0").status_code >= 500 + assert client.put("/c/0/0", content=b"data").status_code >= 500 + + def test_enametoolong_is_still_a_miss(self) -> None: + """A name the store cannot express holds nothing, so 404 is honest.""" + client = TestClient( + store_app(self._store_failing_with(errno.ENAMETOOLONG), methods={"GET", "PUT"}), + raise_server_exceptions=False, + ) + + assert client.get("/c/0/0").status_code == 404 + assert client.put("/c/0/0", content=b"data").status_code == 404 + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestPutBodyLimit: + """`Store.set` takes a whole buffer, so an unbounded body would let one + request size the server's memory use.""" + + def test_body_over_the_limit_is_rejected(self, store: Store) -> None: + client = TestClient(store_app(store, methods={"GET", "PUT"}, max_body_size=64)) + + assert client.put("/key", content=b"x" * 65).status_code == 413 + # Nothing was written. + assert sync(store.get("key", cpu.buffer_prototype)) is None + # A body within the limit still succeeds. + assert client.put("/key", content=b"x" * 64).status_code == 204 + + def test_limit_can_be_lifted(self, store: Store) -> None: + client = TestClient(store_app(store, methods={"GET", "PUT"}, max_body_size=None)) + assert client.put("/key", content=b"x" * 5000).status_code == 204 + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestRangeResponseCorrectness: + """A 206 must describe which bytes it carries, and a range that cannot be + satisfied must say so rather than returning an empty 206.""" + + def test_206_carries_content_range(self, store: Store) -> None: + sync(store.set("key", cpu.buffer_prototype.buffer.from_bytes(b"0123456789"))) + client = TestClient(store_app(store)) + + response = client.get("/key", headers={"Range": "bytes=2-5"}) + assert response.status_code == 206 + assert response.content == b"2345" + assert response.headers["Content-Range"] == "bytes 2-5/*" + + def test_range_beyond_end_is_416(self, store: Store) -> None: + sync(store.set("key", cpu.buffer_prototype.buffer.from_bytes(b"0123456789"))) + client = TestClient(store_app(store)) + + assert client.get("/key", headers={"Range": "bytes=1000-2000"}).status_code == 416 + + def test_inverted_range_is_416(self, store: Store) -> None: + sync(store.set("key", cpu.buffer_prototype.buffer.from_bytes(b"0123456789"))) + client = TestClient(store_app(store)) + + assert client.get("/key", headers={"Range": "bytes=5-2"}).status_code == 416 + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestZeroDimensionalArray: + """A 0-d array has exactly one chunk, spelled `0` in v2 and `c` in v3.""" + + @pytest.mark.parametrize("zarr_format", [2, 3]) + def test_sole_chunk_is_served(self, store: Store, zarr_format: ZarrFormat) -> None: + arr = zarr.create_array(store, shape=(), dtype="i4", zarr_format=zarr_format) + arr[...] = 7 + + client = TestClient(node_app(arr)) + chunk_key = "0" if zarr_format == 2 else "c" + + assert client.get(f"/{chunk_key}").status_code == 200 + # A 1-d coordinate is not valid for a 0-d grid. + assert client.get("/0/0").status_code == 404 + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestGroupAndArrayMetadataKeysAreDistinct: + """A v2 group owns `.zgroup`; `.zarray` belongs to arrays, and vice versa.""" + + def test_node_does_not_claim_the_other_kind_of_metadata(self, store: Store) -> None: + root = zarr.open_group(store, mode="w", zarr_format=2) + arr = root.create_array("a", shape=(2,), chunks=(2,), dtype="f8") + + # Plant both documents so a 404 reflects the key set, not absence. + sync(store.set(".zarray", cpu.buffer_prototype.buffer.from_bytes(b"{}"))) + sync(store.set("a/.zgroup", cpu.buffer_prototype.buffer.from_bytes(b"{}"))) + + assert TestClient(node_app(root)).get("/.zarray").status_code == 404 + assert TestClient(node_app(arr)).get("/.zgroup").status_code == 404 + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestBackgroundServerReportsBoundPort: + """`port=0` asks the OS for a free port, so the server must report the + port it actually bound rather than the zero it was asked for.""" + + def test_port_zero_reports_the_bound_port(self, store: Store) -> None: + import httpx + + from zarr_http_server import serve_background + + sync(store.set("key", cpu.buffer_prototype.buffer.from_bytes(b"hello"))) + + with serve_background(store_app(store), host="127.0.0.1", port=0) as server: + assert server.port != 0 + assert server.url == f"http://127.0.0.1:{server.port}" + # The reported URL is the one that actually serves the data. + assert httpx.get(f"{server.url}/key").content == b"hello" + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestUnopenableChildIsAnError: + """A child that cannot be *judged* must not be reported as absent. + + 404 is a claim about the store's contents, and under the v3 spec an + absent chunk is an uninitialized one -- so a correct reader answers 404 + by silently substituting the array's fill value. Returning it for a child + whose metadata could not be read would materialize zeros over data that + exists. Only a genuinely missing member is a 404; corrupt metadata, an + I/O error, or a codec this process lacks all surface as 5xx. + """ + + def test_child_with_unparseable_metadata_is_not_reported_as_missing(self, store: Store) -> None: + """A corrupt child metadata document must not yield 404.""" + root = zarr.open_group(store, mode="w") + root.create_array("good", shape=(2,), chunks=(2,), dtype="f8") + sync(store.set("junk/zarr.json", cpu.buffer_prototype.buffer.from_bytes(b"not json"))) + + client = TestClient(node_app(root), raise_server_exceptions=False) + + assert client.get("/good/zarr.json").status_code == 200 + assert client.get("/junk/zarr.json").status_code >= 500 + assert client.get("/junk/c/0").status_code >= 500 + + def test_absent_child_is_reported_as_missing(self, store: Store) -> None: + """A member that simply is not there is still a plain 404.""" + root = zarr.open_group(store, mode="w") + root.create_array("good", shape=(2,), chunks=(2,), dtype="f8") + + client = TestClient(node_app(root), raise_server_exceptions=False) + + assert client.get("/nope/zarr.json").status_code == 404 + assert client.get("/junk/c/0").status_code == 404 + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestReadBackWithZarrClient: + """The round-trip the README leads with: serve an array, then open it + with a zarr client over HTTP. + + This needs an HTTP-capable fsspec, which is a client-side concern that + `zarr-http-server` deliberately does not depend on -- it lives in the `docs` + dependency group, alongside the other deps the README examples need. + """ + + def test_served_array_reads_back_identically(self, store: Store) -> None: + """`zarr.open_array(server.url)` should return the same data that was + served, so the README's headline example stays true.""" + pytest.importorskip("fsspec") + pytest.importorskip("aiohttp") + + from zarr_http_server import serve_background + + expected = np.arange(100, dtype="uint8").reshape(10, 10) + arr = zarr.create_array(store, data=expected, chunks=(5, 5), write_data=True) + + port = _get_free_port() + with serve_background(node_app(arr), host="127.0.0.1", port=port) as server: + remote = zarr.open_array(server.url, mode="r") + np.testing.assert_array_equal(remote[:], expected) + + +class TestBackgroundServerBoundedShutdown: + """BackgroundServer.shutdown() must not hang forever on a slow or stuck + in-flight request.""" + + def test_shutdown_returns_promptly_with_slow_inflight_request(self) -> None: + """A request that takes far longer than shutdown_timeout must not + prevent shutdown() from returning within roughly shutdown_timeout, + via uvicorn's force_exit rather than an unbounded thread join.""" + import asyncio + import threading + import time + + import httpx + from starlette.applications import Starlette + from starlette.responses import Response + from starlette.routing import Route + + async def slow(request: Any) -> Response: + # Sleeps far longer than shutdown_timeout below, so a correct + # implementation must force the connection closed rather than + # wait for this to finish. + await asyncio.sleep(SLOW_HANDLER_SECONDS) + return Response(status_code=204) + + app = Starlette(routes=[Route("/slow", slow, methods=["GET"])]) + port = _get_free_port() + server = serve_background( + app, host="127.0.0.1", port=port, shutdown_timeout=SHUTDOWN_TIMEOUT + ) + assert server is not None + + request_errors: list[BaseException] = [] + + def make_slow_request() -> None: + try: + httpx.get(f"http://127.0.0.1:{port}/slow", timeout=10) + except Exception as exc: # noqa: BLE001 -- connection drop when the server force-closes is expected + request_errors.append(exc) + + request_thread = threading.Thread(target=make_slow_request, daemon=True) + request_thread.start() + time.sleep(0.2) # give the request time to actually start + + start = time.monotonic() + server.shutdown() + elapsed = time.monotonic() - start + + # The property is that shutdown is *bounded*, not that it hits a + # particular wall-clock number. Derive the bound from the timeouts + # that produce it rather than hard-coding one: shutdown() waits + # `shutdown_timeout + _SHUTDOWN_JOIN_MARGIN` for a graceful stop, then + # `shutdown_timeout` more after force_exit. A literal here silently + # loses its headroom whenever one of those constants changes -- which + # is what happened when the margin was introduced. + bound = (SHUTDOWN_TIMEOUT + _SHUTDOWN_JOIN_MARGIN) + SHUTDOWN_TIMEOUT + 1.0 + assert elapsed < bound, f"shutdown() took {elapsed:.2f}s, expected under {bound:.1f}s" + # ...and the point of it all: far less than the handler's own sleep, + # which an unbounded join would have waited out in full. + assert elapsed < SLOW_HANDLER_SECONDS + + request_thread.join(timeout=10) + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestCorsOptionsCoverTheMiddleware: + """`CorsOptions` exposes every `CORSMiddleware` parameter, with our own + defaults only for the two the server knows about.""" + + _ORIGIN = "https://viewer.example" + + def _client(self, store: Store, cors: CorsOptions) -> TestClient: + return TestClient(store_app(store, methods={"GET"}, cors_options=cors)) + + def test_ranged_response_is_readable_cross_origin(self, store: Store) -> None: + """`Content-Range` is not CORS-safelisted, so without `expose_headers` + a browser reads the bytes but cannot learn which bytes it got.""" + sync(store.set("k", cpu.buffer_prototype.buffer.from_bytes(b"0123456789"))) + client = self._client(store, {"allow_origins": [self._ORIGIN], "allow_methods": ["GET"]}) + + response = client.get("/k", headers={"Origin": self._ORIGIN, "Range": "bytes=0-3"}) + + assert response.status_code == 206 + assert response.headers["access-control-expose-headers"] == "Content-Range" + + def test_range_survives_a_preflight(self, store: Store) -> None: + """A preflight naming `Range` must be allowed, not answered 400.""" + client = self._client(store, {"allow_origins": [self._ORIGIN], "allow_methods": ["GET"]}) + + preflight = client.options( + "/k", + headers={ + "Origin": self._ORIGIN, + "Access-Control-Request-Method": "GET", + "Access-Control-Request-Headers": "range", + }, + ) + + assert preflight.status_code == 200 + assert "Range" in preflight.headers["access-control-allow-headers"] + + def test_caller_value_replaces_the_default(self, store: Store) -> None: + """Our defaults apply only to absent keys; a supplied key wins outright + so `expose_headers: []` means "expose nothing", not "expose ours".""" + sync(store.set("k", cpu.buffer_prototype.buffer.from_bytes(b"data"))) + base: CorsOptions = {"allow_origins": [self._ORIGIN], "allow_methods": ["GET"]} + + empty = self._client(store, {**base, "expose_headers": []}) + assert ( + "access-control-expose-headers" + not in empty.get("/k", headers={"Origin": self._ORIGIN}).headers + ) + + custom = self._client(store, {**base, "expose_headers": ["X-Custom"]}) + assert ( + custom.get("/k", headers={"Origin": self._ORIGIN}).headers[ + "access-control-expose-headers" + ] + == "X-Custom" + ) + + def test_parameters_beyond_the_original_two_are_reachable(self, store: Store) -> None: + """The regression this class exists for: `CorsOptions` used to carry + only `allow_origins` and `allow_methods`, sealing the rest away.""" + sync(store.set("k", cpu.buffer_prototype.buffer.from_bytes(b"data"))) + client = self._client( + store, + { + "allow_origin_regex": r"https://.*\.example", + "allow_credentials": True, + "max_age": 30, + }, + ) + origin = "https://sub.example" + + response = client.get("/k", headers={"Origin": origin}) + assert response.headers["access-control-allow-origin"] == origin + assert response.headers["access-control-allow-credentials"] == "true" + + preflight = client.options( + "/k", headers={"Origin": origin, "Access-Control-Request-Method": "GET"} + ) + assert preflight.headers["access-control-max-age"] == "30" + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestUvicornOptionsAreNotSealedOff: + """`uvicorn.Config` takes ~50 parameters; naming four of them and dropping + the rest would put TLS, proxy headers, `root_path` and log level out of + reach entirely.""" + + def test_options_reach_uvicorn_config(self, store: Store) -> None: + """A key this signature does not name still lands on the Config.""" + from zarr_http_server import serve_background + + server = serve_background( + store_app(store), + host="127.0.0.1", + port=0, + uvicorn_options={"root_path": "/api", "log_level": "warning"}, + ) + assert server is not None + try: + config = server._server.config + assert config.root_path == "/api" + assert config.log_level == "warning" + # Ours still apply where the caller did not override them. + assert config.timeout_graceful_shutdown == 5 + finally: + server.shutdown() + + def test_caller_options_win_over_ours(self, store: Store) -> None: + """The merge order is ours-then-theirs, so a caller can override even + an option this signature sets itself.""" + from zarr_http_server import serve_background + + server = serve_background( + store_app(store), + host="127.0.0.1", + port=0, + shutdown_timeout=5, + uvicorn_options={"timeout_graceful_shutdown": 11}, + ) + assert server is not None + try: + assert server._server.config.timeout_graceful_shutdown == 11 + finally: + server.shutdown() + + @pytest.mark.skipif(not hasattr(socket, "AF_UNIX"), reason="needs unix domain sockets") + def test_non_tcp_bind_reports_no_url(self, store: Store, tmp_path: pathlib.Path) -> None: + """A unix-socket bind has no host and port, so `url` must say so rather + than naming an address nothing is listening on.""" + import httpx + + from zarr_http_server import serve_background + + sock = str(tmp_path / "s.sock") + server = serve_background(store_app(store), uvicorn_options={"uds": sock}) + assert server is not None + try: + assert server.url is None + assert server.host is None + assert server.port is None + # ...and it really is serving, just not over TCP. + with httpx.Client(transport=httpx.HTTPTransport(uds=sock)) as client: + response = client.get("http://localhost/zarr.json", timeout=10) + assert response.status_code in (200, 404) + finally: + server.shutdown() + + +class TestHeadDoesNotTransferTheBody: + """A HEAD body is discarded at the wire, so building one is pure waste.""" + + def test_head_does_not_read_the_value(self, tmp_path: pathlib.Path) -> None: + """The regression this class exists for: HEAD used to fall through to + the GET handler and pull the whole object to report its length.""" + read = {"bytes": 0} + + class CountingLocal(LocalStore): + async def get(self, key: str, prototype: Any, byte_range: Any = None) -> Any: + buf = await super().get(key, prototype, byte_range) + if buf is not None: + read["bytes"] += len(buf) + return buf + + store = CountingLocal(str(tmp_path / "root")) + payload = b"x" * 100_000 + sync(store.set("big", cpu.buffer_prototype.buffer.from_bytes(payload))) + client = TestClient(store_app(store)) + + read["bytes"] = 0 + response = client.head("/big") + + assert response.status_code == 200 + assert response.headers["content-length"] == str(len(payload)) + assert read["bytes"] == 0, "HEAD read the value to report its length" + + @pytest.mark.parametrize("store", ["memory"], indirect=True) + def test_head_of_a_missing_key_is_404(self, store: Store) -> None: + client = TestClient(store_app(store)) + assert client.head("/nope").status_code == 404 + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestMetadataContentType: + """Metadata documents are JSON in every zarr format, not just v3.""" + + @pytest.mark.parametrize( + ("zarr_format", "key"), [(3, "zarr.json"), (2, ".zarray"), (2, ".zattrs")] + ) + def test_metadata_is_served_as_json( + self, store: Store, zarr_format: ZarrFormat, key: str + ) -> None: + zarr.create_array( + store, name="a", shape=(4,), chunks=(2,), dtype="i4", zarr_format=zarr_format + ) + sync(store.set(f"a/{key}", cpu.buffer_prototype.buffer.from_bytes(b"{}"))) + + response = TestClient(store_app(store)).get(f"/a/{key}") + + assert response.status_code == 200 + assert response.headers["content-type"].startswith("application/json") + + +@pytest.mark.parametrize("store", ["memory"], indirect=True) +class TestCorsAllowMethodsMatchTheRoute: + """Advertising a method the route rejects is a promise the server cannot + keep: the browser caches the preflight and every later call 405s.""" + + def test_wildcard_expands_to_what_is_served(self, store: Store) -> None: + """`"*"` is the idiomatic "everything this app does", so it expands to + exactly that rather than to every verb Starlette knows.""" + app = store_app( + store, methods={"GET"}, cors_options={"allow_origins": ["*"], "allow_methods": ["*"]} + ) + + preflight = TestClient(app).options( + "/k", headers={"Origin": "https://e.test", "Access-Control-Request-Method": "GET"} + ) + + advertised = preflight.headers["access-control-allow-methods"] + assert set(advertised.replace(" ", "").split(",")) == {"GET", "HEAD"} + + def test_advertising_an_unserved_method_is_rejected(self, store: Store) -> None: + with pytest.raises(ValueError, match="does not serve"): + store_app( + store, + methods={"GET"}, + cors_options={"allow_origins": ["*"], "allow_methods": ["GET", "DELETE"]}, + ) + + def test_head_counts_as_served_when_get_is(self, store: Store) -> None: + """Starlette routes HEAD wherever GET goes, so naming it is not an error.""" + store_app( + store, + methods={"GET"}, + cors_options={"allow_origins": ["*"], "allow_methods": ["GET", "HEAD"]}, + ) + + def test_absent_allow_methods_is_left_alone(self, store: Store) -> None: + """Starlette's GET-only default stands; widening it to everything + served would newly advertise PUT on a write-enabled app.""" + app = store_app(store, methods={"GET", "PUT"}, cors_options={"allow_origins": ["*"]}) + + preflight = TestClient(app).options( + "/k", headers={"Origin": "https://e.test", "Access-Control-Request-Method": "GET"} + ) + + assert "PUT" not in preflight.headers["access-control-allow-methods"] + + +class TestReadOnlyServing: + """The guarantees a read-only deployment rests on. + + Two independent layers: `methods` decides what the route answers, and the + store decides whether a write could succeed at all. The second is the one + that survives a misconfiguration of the first, so both are pinned here. + """ + + @pytest.mark.parametrize("store", ["memory"], indirect=True) + @pytest.mark.parametrize("method", ["PUT", "POST", "DELETE", "PATCH"]) + def test_default_app_refuses_every_mutating_method(self, store: Store, method: str) -> None: + """The default is read-only: no argument is needed to get there, and + nothing a client sends can write.""" + sync(store.set("k", cpu.buffer_prototype.buffer.from_bytes(b"data"))) + before = sync(store.get("k", cpu.buffer_prototype)).to_bytes() + client = TestClient(store_app(store), raise_server_exceptions=False) + + response = client.request(method, "/k", content=b"overwritten") + + assert response.status_code == 405 + assert sync(store.get("k", cpu.buffer_prototype)).to_bytes() == before + + @pytest.mark.parametrize("store", ["memory"], indirect=True) + def test_post_can_never_be_enabled(self, store: Store) -> None: + """POST is not merely unrouted, it is unconfigurable: there is no + handler behavior for it, so asking is an error rather than a no-op.""" + with pytest.raises(ValueError, match="Unsupported HTTP method"): + store_app(store, methods={"GET", "POST"}) # type: ignore[arg-type] + + def test_read_only_store_refuses_writes_independently_of_methods( + self, tmp_path: pathlib.Path + ) -> None: + """The layer that survives getting `methods` wrong. + + Constructed through the private builder because the public entry + points now reject this combination outright; the handler check stays + as the backstop for a store whose `read_only` is not fixed. + """ + from zarr_http_server._serve import _make_starlette_app + + writable = LocalStore(str(tmp_path / "root")) + sync(writable.set("k", cpu.buffer_prototype.buffer.from_bytes(b"data"))) + + app = _make_starlette_app(methods={"GET", "PUT"}) + app.state.store = writable.with_read_only(True) + app.state.node = None + app.state.prefix = "" + app.state.max_body_size = None + + response = TestClient(app, raise_server_exceptions=False).put("/k", content=b"x") + + assert response.status_code == 403 + assert sync(writable.get("k", cpu.buffer_prototype)).to_bytes() == b"data" + + def test_put_on_a_read_only_store_is_rejected_at_construction( + self, tmp_path: pathlib.Path + ) -> None: + """A write that could never succeed is a configuration error, not a + runtime 403 delivered to whoever happens to try first.""" + store = LocalStore(str(tmp_path / "root")).with_read_only(True) + + with pytest.raises(ValueError, match="store is read-only"): + store_app(store, methods={"GET", "PUT"}) + + def test_read_only_node_is_rejected_at_construction(self, tmp_path: pathlib.Path) -> None: + """The same check applies to a node, whose store it inherits.""" + store = LocalStore(str(tmp_path / "root")) + zarr.create_array(store, shape=(4,), chunks=(2,), dtype="i4", compressors=None) + read_only_array = zarr.open_array(store, mode="r") + + with pytest.raises(ValueError, match="store is read-only"): + node_app(read_only_array, methods={"GET", "PUT"}) + + +class TestMethodSetConstants: + """Named method sets let a call site state its intent, and make writable + deployments findable: every writable app must name one.""" + + @pytest.mark.parametrize("store", ["memory"], indirect=True) + def test_read_only_constant_matches_the_default(self, store: Store) -> None: + """Passing it explicitly and omitting `methods` are the same server, so + saying so out loud costs nothing.""" + sync(store.set("k", cpu.buffer_prototype.buffer.from_bytes(b"data"))) + + default = TestClient(store_app(store), raise_server_exceptions=False) + named = TestClient( + store_app(store, methods=READ_ONLY_HTTP_METHODS), raise_server_exceptions=False + ) + + for method in ["GET", "HEAD", "PUT", "POST", "DELETE", "PATCH"]: + assert default.request(method, "/k").status_code == ( + named.request(method, "/k").status_code + ) + + @pytest.mark.parametrize("store", ["memory"], indirect=True) + @pytest.mark.parametrize("method", ["PUT", "POST", "DELETE", "PATCH"]) + def test_read_only_constant_refuses_writes(self, store: Store, method: str) -> None: + sync(store.set("k", cpu.buffer_prototype.buffer.from_bytes(b"data"))) + client = TestClient( + store_app(store, methods=READ_ONLY_HTTP_METHODS), raise_server_exceptions=False + ) + + assert client.request(method, "/k", content=b"x").status_code == 405 + assert sync(store.get("k", cpu.buffer_prototype)).to_bytes() == b"data" + + @pytest.mark.parametrize("store", ["memory"], indirect=True) + def test_read_write_constant_permits_exactly_put(self, store: Store) -> None: + """It grants writes -- and still not POST, which has no handler.""" + client = TestClient( + store_app(store, methods=READ_WRITE_HTTP_METHODS), raise_server_exceptions=False + ) + + assert client.put("/k", content=b"data").status_code == 204 + assert client.post("/k", content=b"data").status_code == 405 + assert sync(store.get("k", cpu.buffer_prototype)).to_bytes() == b"data" + + def test_constants_cannot_be_mutated_by_a_caller(self) -> None: + """Frozen, so one caller cannot widen the default for every other.""" + assert isinstance(READ_ONLY_HTTP_METHODS, frozenset) + assert isinstance(READ_WRITE_HTTP_METHODS, frozenset) + assert "PUT" not in READ_ONLY_HTTP_METHODS + + def test_constants_match_the_types_they_model(self) -> None: + """The sets are derived from the Literals, so they cannot disagree + about what this server serves. Pinning the contents here makes + widening either type a deliberate, visible edit.""" + assert frozenset(get_args(ReadOnlyHTTPMethod)) == READ_ONLY_HTTP_METHODS + assert set(READ_ONLY_HTTP_METHODS) == {"GET", "HEAD"} + assert set(READ_WRITE_HTTP_METHODS) == {"GET", "HEAD", "PUT"} + # Read-only is a strict subset: the only difference is the write verb. + assert READ_ONLY_HTTP_METHODS < READ_WRITE_HTTP_METHODS + assert {"PUT"} == READ_WRITE_HTTP_METHODS - READ_ONLY_HTTP_METHODS + + +class TestServeAnyApp: + """`serve` runs whatever ASGI app it is handed, which is what makes + several nodes on one port possible.""" + + @staticmethod + def _two_mounted_arrays() -> tuple[Starlette, bytes, bytes]: + """Two arrays in *separate* stores, so no common parent exists and + mounting is the only way to serve both from one server.""" + first, second = MemoryStore(), MemoryStore() + one = zarr.create_array(first, shape=(4,), chunks=(2,), dtype="i4", compressors=None) + other = zarr.create_array(second, shape=(4,), chunks=(2,), dtype="i4", compressors=None) + one[:] = 7 + other[:] = 9 + + app = Starlette( + routes=[Mount("/first", app=node_app(one)), Mount("/second", app=node_app(other))] + ) + return app, np.full(2, 7, dtype="i4").tobytes(), np.full(2, 9, dtype="i4").tobytes() + + def test_mounted_apps_each_serve_their_own_node(self) -> None: + app, first_chunk, second_chunk = self._two_mounted_arrays() + client = TestClient(app, raise_server_exceptions=False) + + assert client.get("/first/zarr.json").status_code == 200 + assert client.get("/second/zarr.json").status_code == 200 + assert client.get("/first/c/0").content == first_chunk + assert client.get("/second/c/0").content == second_chunk + + @pytest.mark.parametrize( + "path", + [ + "/first/%2e%2e/second/zarr.json", + "/first/..%2f..%2fsecond/zarr.json", + "/first/%2e%2e%2fsecond/c/0", + "/first/%2fsecond/zarr.json", + ], + ) + def test_one_mount_cannot_reach_another(self, path: str) -> None: + """Per-node validation runs inside each mount, so composing apps does + not widen what any of them serves.""" + app, _, _ = self._two_mounted_arrays() + + assert TestClient(app, raise_server_exceptions=False).get(path).status_code == 404 + + def test_serve_runs_a_composed_app_in_the_background(self) -> None: + """The gap `serve` closes: a composed app previously had no way to use + the background-server ergonomics, only a blocking `uvicorn.run`.""" + import httpx + + app, first_chunk, second_chunk = self._two_mounted_arrays() + + server = serve_background(app, host="127.0.0.1", port=0) + try: + assert server.url is not None + assert httpx.get(f"{server.url}/first/c/0", timeout=30).content == first_chunk + assert httpx.get(f"{server.url}/second/c/0", timeout=30).content == second_chunk + finally: + server.shutdown() + + +class TestPortSelection: + """`port="auto"` prefers a predictable port but never fails over one. + + An explicit port means the opposite -- bind exactly that or fail -- because + a caller who names one usually has something else expecting the server + there, and silently moving would break it while looking healthy. + """ + + @staticmethod + def _free_port() -> int: + """A port that was free a moment ago. Only ever used as the *preferred* + port, never bound afterwards, so the usual bind-then-close race does + not apply: if something takes it, that is the case under test.""" + with socket.socket() as sock: + sock.bind(("127.0.0.1", 0)) + return int(sock.getsockname()[1]) + + def test_preferred_port_is_used_when_free(self) -> None: + preferred = self._free_port() + + sock = _bind_preferred_or_free("127.0.0.1", preferred) + try: + assert sock.getsockname()[1] == preferred + finally: + sock.close() + + def test_falls_back_when_the_preferred_port_is_taken(self) -> None: + with socket.socket() as squatter: + squatter.bind(("127.0.0.1", 0)) + squatter.listen() + taken = int(squatter.getsockname()[1]) + + sock = _bind_preferred_or_free("127.0.0.1", taken) + try: + assert sock.getsockname()[1] != taken + finally: + sock.close() + + def test_address_family_follows_the_host(self) -> None: + """Hard-coding AF_INET would bind the wrong family for an IPv6 host.""" + try: + sock = _bind_preferred_or_free("::1", 0) + except OSError: # pragma: no cover - depends on the host's networking + pytest.skip("no IPv6 loopback available") + try: + assert sock.family == socket.AF_INET6 + finally: + sock.close() + + @pytest.mark.parametrize("store", ["memory"], indirect=True) + def test_auto_produces_a_working_server(self, store: Store) -> None: + """Whichever port it lands on, `url` names it and the server answers.""" + import httpx + + server = serve_background(store_app(store)) + try: + assert server.url is not None + assert server.port is not None + assert httpx.get(f"{server.url}/nope", timeout=30).status_code == 404 + finally: + server.shutdown() + + # uvicorn answers a failed bind with `sys.exit` on its own thread, which + # pytest reports as an unhandled thread exception -- and this package turns + # warnings into errors. That exit is exactly what the RuntimeError below + # reports to the caller, so it is expected here rather than a defect. + @pytest.mark.filterwarnings("ignore::pytest.PytestUnhandledThreadExceptionWarning") + @pytest.mark.parametrize("store", ["memory"], indirect=True) + def test_an_explicit_port_that_is_taken_fails(self, store: Store) -> None: + """The regression this class exists for: `auto` must not leak into the + explicit case, where a collision has to be loud.""" + with socket.socket() as squatter: + squatter.bind(("127.0.0.1", 0)) + squatter.listen() + taken = int(squatter.getsockname()[1]) + + with pytest.raises(RuntimeError, match="may already be in use"): + serve_background(store_app(store), port=taken) + + @pytest.mark.parametrize("store", ["memory"], indirect=True) + def test_port_zero_still_means_any_free_port(self, store: Store) -> None: + """`0` keeps its OS meaning rather than being folded into `auto`.""" + server = serve_background(store_app(store), port=0) + try: + 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}, +] + +[package.metadata.requires-dev] +docs = [ + { name = "griffe-inherited-docstrings", specifier = "==1.1.3" }, + { name = "mkdocs", specifier = "==1.6.1" }, + { name = "mkdocs-material", specifier = "==9.7.7" }, + { name = "mkdocstrings", specifier = "==1.0.6" }, + { name = "mkdocstrings-python", specifier = "==2.0.5" }, + { name = "ruff", specifier = "==0.16.0" }, +] +examples = [ + { name = "fsspec", extras = ["http"] }, + { name = "httpx" }, +] +test = [ + { name = "httpx" }, + { name = "httpx2" }, + { name = "hypothesis" }, + { name = "ipykernel" }, + { name = "nbclient" }, + { name = "nbformat" }, + { name = "pytest" }, +] diff --git a/pyproject.toml b/pyproject.toml index 8b8534cb65..6626f8f0bc 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -160,9 +160,9 @@ omit = [ version.source = "vcs" # Only consider zarr-python's own `v*` tags when deriving the version. Without # this filter `git describe` matches the most recent tag of any shape, -# including the `zarr_metadata-v*` tags used to release the zarr-metadata -# subpackage — which would make a from-source build report a `0.2.x` version -# instead of `3.x`. +# including the `zarr_metadata-v*` and `zarr_http_server-v*` tags used to +# release the subpackages under `packages/` — which would make a from-source +# build report e.g. a `0.2.x` version instead of `3.x`. version.raw-options = { git_describe_command = "git describe --dirty --tags --long --match v*" } [tool.hatch.build]